Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3038 ATGGGGAAGACATACTCTAAGGATGGGCGAAAGACCTACATTGTCTACATGGGTGATCATCCTAAGGGCATGCAATCCACAGAATTACTTCACATTAGTATGGTTCAAAATATCCTCGGCAGCAAATTTGCACCAGATGCTTTGCTCCATAGCTACAAGAAGAGTTTTAATGGATTTGTTGTAAAGCTAACAGAAGAGGAAGCGGTGAGAATGGCAGGATTGGACGGTGTGGTTTCCGTTttcccaaacaaaaaaaataagttgcaTACAACAAGGTCTTGGGACTTCATAGGCTTCTCTCAGAATGTCAAAAGAACAAATATAGAGAGCGACATAATGGTTGGAGCAATAGATTCCGGAATTTGGCCCGAGTCTGATAGTTTTAATGACGAAGGATTTGGCCCACCACCACAAAAATGGAAGGGCAAATGCTACAACTTTACGTGCAACAACAAAATAATTGGAGCAAAATATTTTCGCATGGATGGTTCATACGGAAAAGATGACATTATATCTCCCAGGGATTCAGTTGGTCATGGGACTCACTGTGCATCCATTGCTGCTGGAAACTCAGTTGAGTCCACAAGTTTTTTTGGCCTTGCCTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTATACAAACCTTGTTGGTCATCAGGTTGTGATGATGCTGACATCCTTCAAGCATTTGATGAAGCAATTGAAGACGGTGTTGACATCATTTCCATTTCACTGGGACCTGGAAACGTAAAATATAACAACTATTTCCATGATATATTCGCCATAGGGGCTTTCCATGCAATGAAGATAGGCATATTAACGTCCAATTCTGTTGGTAATAGAGGTCCAAAGCTGTATACAACTTCTAAAAATGCACCATGGTTACTTTCTGTAGCTGCTAGCACTATAGACAGAAAGTTTTTCACCAATGTTCAGTTAGGTGATGGCACAGTCTATGAGGGAGTTTCAGTAAATACATTTGATCTTAATAATAAAAGCTATCCATTAATTTATGCTGGAGATGCCCCCAACATAACCGGTGGATACAATAGTTCCATATCCAGGTTGTGCCTTCAAAATTCTTTGGATGAAGATTTGGTCAAGGGAAAGATTGTTTTGTGTGATGGTTTTCAAGGTACTACATCTGTAGGATTGGTTTCTAGAGTAGCTGGTATTTTAGTAAGAAGTTTAAGGCCAAAAGATGTCGCAAATACGTTTGAATTGCCAGTGGTTCACCTTAGCCTAAAAGATGGGACACTCATACAATCTTACATAAATTCAAcaagTAATCCGACTGCCGTCATATTTAAGAGTAATGAAGGCAATGACTCATTAGCCCCTTACATAGCTTCATTCTCATCTAGAGGTCCAAATTCAATCACACCAAACATTCTTAAGCCTGATCTAGCTGCTCCAGGAGTTGACATTTTAGCTGCATGGCCTCCAATTGATCCTGTTTTTGAAGGTAAAGGTTACAAGAGAAAACCAAACTACAATATACTATCTGGCACTTCAATGGCATGCCCTCATGCTACTGCAGCAGCTGCCTACATCAAATCATTTCACCCTGATTGGTCACCTGCAATAATCAAATCGGCATTAATGACCACTGCTACCCCAATGAGTGCCGCACTTAATCCCGAAGCTGAATTTGCTTATGGTGCGGGACAAATTGACCCCATCAAGGCAGCGAATCCAGGATTAGTATATGATGCCAGTGAAATTGATTATGTCAACTTTCTATGCGAACAAGGTTATGATGCTAAAAAGCTACAAATTATTACAAATGACAATAGTAGCTGTACACGACCCAATAATGGAATGTTTCGGGATCTCAATCTCCCATCTTTTGCTCTCTCCATCAACACCTCAACATTTTTTAGTGCTGTTTTTCGTAGAACCCTTACCAATGTTGGATCTGCTACATCAAGATATAAAGCTAAAGTAACTACACCTCCATCTTTGTTAAACATCAAAGTGGAGCCAGATGTTTTGTCCTTCTCATTGGTGGGTCAAAAGAAGTCCTTCTCTCTTAGCATTGAAGGGGAAATTAATGTGGGCatagtttcttcttctttaatctGGGATGATGGCACTTTCCAAGTAAGGAGCCCTATTGTTGTGTATGCTGCATAA 2148 0.398 MGKTYSKDGRKTYIVYMGDHPKGMQSTELLHISMVQNILGSKFAPDALLHSYKKSFNGFVVKLTEEEAVRMAGLDGVVSVFPNKKNKLHTTRSWDFIGFSQNVKRTNIESDIMVGAIDSGIWPESDSFNDEGFGPPPQKWKGKCYNFTCNNKIIGAKYFRMDGSYGKDDIISPRDSVGHGTHCASIAAGNSVESTSFFGLASGTARGGVPSARIAVYKPCWSSGCDDADILQAFDEAIEDGVDIISISLGPGNVKYNNYFHDIFAIGAFHAMKIGILTSNSVGNRGPKLYTTSKNAPWLLSVAASTIDRKFFTNVQLGDGTVYEGVSVNTFDLNNKSYPLIYAGDAPNITGGYNSSISRLCLQNSLDEDLVKGKIVLCDGFQGTTSVGLVSRVAGILVRSLRPKDVANTFELPVVHLSLKDGTLIQSYINSTSNPTAVIFKSNEGNDSLAPYIASFSSRGPNSITPNILKPDLAAPGVDILAAWPPIDPVFEGKGYKRKPNYNILSGTSMACPHATAAAAYIKSFHPDWSPAIIKSALMTTATPMSAALNPEAEFAYGAGQIDPIKAANPGLVYDASEIDYVNFLCEQGYDAKKLQIITNDNSSCTRPNNGMFRDLNLPSFALSINTSTFFSAVFRRTLTNVGSATSRYKAKVTTPPSLLNIKVEPDVLSFSLVGQKKSFSLSIEGEINVGIVSSSLIWDDGTFQVRSPIVVYAA 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3038 715 CDD Peptidases_S8_3 87 543 IPR034197 -
Ssu7g3038 715 SUPERFAMILY Subtilisin-like 88 572 IPR036852 GO:0004252|GO:0006508
Ssu7g3038 715 PANTHER PUTATIVE-RELATED 8 713 - -
Ssu7g3038 715 Pfam Peptidase inhibitor I9 12 89 IPR010259 -
Ssu7g3038 715 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 89 IPR037045 -
Ssu7g3038 715 Pfam Subtilase family 110 560 IPR000209 GO:0006508|GO:0008236
Ssu7g3038 715 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 713 IPR045051 -
Ssu7g3038 715 CDD PA_subtilisin_like 314 439 - -
Ssu7g3038 715 ProSitePatterns Serine proteases, subtilase family, histidine active site. 179 189 IPR022398 -
Ssu7g3038 715 Gene3D - 308 446 - -
Ssu7g3038 715 Gene3D Peptidase S8/S53 domain 111 581 IPR036852 GO:0004252|GO:0006508
Ssu7g3038 715 ProSitePatterns Serine proteases, subtilase family, serine active site. 507 517 IPR023828 -
Ssu7g3038 715 Gene3D - 585 714 - -
Ssu7g3038 715 ProSiteProfiles Serine proteases, subtilase domain profile. 93 568 - -
Ssu7g3038 715 PRINTS Subtilisin serine protease family (S8) signature 506 522 IPR015500 -
Ssu7g3038 715 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Ssu7g3038 715 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Ssu7g3038 715 Pfam Fibronectin type-III domain 615 712 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3038 Ssu-Chr7 69770242 69821076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3038 10 714 Subtilisin-like Serine Gene Family AT5G59100 49.652 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3038 - - gmx:100800042 1189.87