Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3032 ATGCCAGGCATTCCTGTTGCGGCTCGTGCAACCTCAAGCCATCCTGATGCTTGTGAACATTTATCTGTGGAAGAGGAGCTTGCAGCTGAAGAAAGTCTTTCAATTTATTGCAAGCCCGTAGAGCTATACAACATTCTTCAACGACGTGCCATGAGAAATGATAAAGGCGAAGCACAAGAAGAGGCAAATTTTACACTCCCTGAAGTCAACAAGTTAGCTGAGGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGGAAAACTCAAATTTATCATCTGGAGTCAATTCAAATGCTATGCCTTCGGATCTGAATCATCTGGCTTTTTTTGAATCGGGAGAATACTGCCTTTGTGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGAGCAGAGATTATGTCAACTGTCGATTTGCTTCCATGTATTCTGAAGTCAGATTTTCAAAATGAGGACACAAGAGTCTCCGTTCAAGTTCCCTCTAATTTTGAGAATATGAGTATGTCAAAGCAAGTACAGATCACAATTTCTGCTGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTATCTTTCGTATGCAGGCAGTGAAGTACCATCCTCATCATTATCTCATATGATCggGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGGACAGAAgTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGTGCTTGTTTTAAGGGTTTAAGATATCATTTGTCCTCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCAGATGAATGTCATGCAGTAAATGTGTCTGTGAAAAATGATATCTCAAGATCAGAGATTGTTGCTGATGATGTTGATCCAAGAGtgcaaacatttttcttttgTGGAAAGCCTCTTAAGCGTAGGACACCAAAGGACCAATCTTTGAAAAATGCAATGGGTTTGGAGTCTGGCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGGATTTCTGCCACAATTATTCGATCACATCCTGACCGAGACTCTGTCCAGTCAATGTCTGACTGTGATCAAGCAGTGCTTCAGTTTGCCAAGACAAGGAAGTTGTCAATTGAGCGTTCTGACTCACGAAACAGTGCCCTCTTGAGGAAGCGACAATTTTTTCATTCTCACAAAGCTCAGCCAATGGCAATTGAACAAGTTCTATCAGATAAAGATAGCGAAGATgaagttgatgatgatgttgccGATTTTGAAGATCGAAGGATGcttgaaaattttgttgacGTGAGCAAGGATGAGAAgaatttcatgcatatgtggaACTCTTTTGTTCGGAAGCATCGTGTGATTGCGGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCAACATTGCATGCACCTGAGTTTGTTCGATCCCGTTCACTGGCTGGGTGTTGGAGAATATTTATGGTCAAATTATACAATCATGGTCTTCTAGATGCTCGGACCATGAATGACTGTAATATTATTCTTGAGCAATACCATAAGCAGAATTCAGATCCCAAAAGCTAA 1611 0.3886 MPGIPVAARATSSHPDACEHLSVEEELAAEESLSIYCKPVELYNILQRRAMRNDKGEAQEEANFTLPEVNKLAEEARSCSLDILFVSTATVENSNLSSGVNSNAMPSDLNHLAFFESGEYCLCGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFQNEDTRVSVQVPSNFENMSMSKQVQITISAEEFGAKEKSPYLSYAGSEVPSSSLSHMIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCACFKGLRYHLSSSHDLFNFEFWVSDECHAVNVSVKNDISRSEIVADDVDPRVQTFFFCGKPLKRRTPKDQSLKNAMGLESGFPAGETDILEKDDGISATIIRSHPDRDSVQSMSDCDQAVLQFAKTRKLSIERSDSRNSALLRKRQFFHSHKAQPMAIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNFMHMWNSFVRKHRVIADGHISWACEAFSTLHAPEFVRSRSLAGCWRIFMVKLYNHGLLDARTMNDCNIILEQYHKQNSDPKS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3032 536 PANTHER POLYCOMB GROUP PROTEIN 14 53 - -
Ssu7g3032 536 PANTHER POLYCOMB GROUP PROTEIN 55 535 - -
Ssu7g3032 536 Pfam VEFS-Box of polycomb protein 387 522 IPR019135 -
Ssu7g3032 536 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 14 53 - -
Ssu7g3032 536 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 55 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3032 Ssu-Chr7 69342319 69371685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3032 56 526 C2H2 Transcription Factor Family AT5G51230 55.268 2.20e-174 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3032 - - gmx:100798991 890.567