Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3029 ATGGGCGTTGAGAACTACCACGTGATCGAACTCGTCGGCGAGGGTTCCTTCGGGAAGGTATATAAGGGAAGGCGCAAGCACACGGGACAGACCGTTGCGATGAAGTTCATAATGAAGCACGGGAAGACCGAGAAGGATATTCACAATTTAAGACAGGAAATCGAGATCTTAAGAAAGTTGAAGCACGGAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTTGTTACAGAATTTGCACAAgGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCCTTACATTATTTGCATTCCAATCGGATCATTCATCGTGATATGAAGCCCCAAAACATTCTAATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGCACTCCGTTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATACTGTATGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTTTATGCTCTAATCAGACACATTGTTAAGGATCCTGTTAAATATCCAGATCGCATGAGTCcaaatttcaaaagctttttaaagGGTTTGCTTAATAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCATTTGTTAAAGAAACCTCTGATGAACTTGAGGCCAGGGAATTGCGAGAGATAAGTGGTTCACCCAGTGCACAGTGA 837 0.411 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDELEARELREISGSPSAQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3029 278 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3029 278 Coils Coil 40 60 - -
Ssu7g3029 278 PANTHER PROTEIN KINASE RELATED 1 259 IPR045193 GO:0004674
Ssu7g3029 278 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Ssu7g3029 278 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3029 278 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g3029 278 PIRSF ILK 2 253 - -
Ssu7g3029 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Ssu7g3029 278 SUPERFAMILY Protein kinase-like (PK-like) 3 263 IPR011009 -
Ssu7g3029 278 CDD STKc_STK36 4 256 - -
Ssu7g3029 278 Gene3D Transferase(Phosphotransferase) domain 1 2 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3029 Ssu-Chr7 68848957 68852714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g3029 1 269 AGC Kinase Gene Family AT3G08720 37.906 6.94e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Ssu7g3029 Pkinase 1.1e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3029 K06228 - gmx:100813995 549.28