Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2989 ATGGCCGCGGCAGCACCGCCACTGGAAACCGCCCCATTGGGTCACCCCCTCTTCAAGCGCGTCCGCCTGGCCACCCCCTCGGACGTGCCCCACATCCACAAACTAATCCACCAGATGGCCGTCTACGAAGGCCTCAGCCACCTCTTCTCCGCCACCGAGCCCTCCCTCTCCGCCACCCTCTTCTCCCCCACCCACCACCCCTTCCGATCCTTCACGATCTTCCTTATAGAAGTTTCCCCCAACCCCTTCGCCGATTCCCTCTTCGACGCCAACCCTTTCTACAAACCCACGGTTGAAGTCGCGAACTTGGACCGCCCGATCCATGACCCAGAAAGGGAAACGTTCAAGTCCCCTCACGGAAACGACGTTTGCGTTGCCGGGTTTGTGTTGTTTTTCCCTAACTACGCTACCCTTCTAGGGAAGCCCGGGTTTTACGTGGAGAGCTTGTATGTGAGGAAGTGTTACAGAAGGCAGGGGTTTGGCAGAACGTTGTTCTCTGCGGTGGCAAGGCAAGCGGCGAAGATGGGGTACGGAAAGGTCGATTGGGTTGTGCTTGATTGGAATGTTAATGCCCTGAAGTTTTATGAAGAGATGGGTGCTGACATCATAGCGGAACATAGGTTTTGCAGGTTGACTGGGGAGGCTCTTAAGGCTTTGGAGGCGCTGATTAAAAATGTTGGTTAA 684 0.557 MAAAAPPLETAPLGHPLFKRVRLATPSDVPHIHKLIHQMAVYEGLSHLFSATEPSLSATLFSPTHHPFRSFTIFLIEVSPNPFADSLFDANPFYKPTVEVANLDRPIHDPERETFKSPHGNDVCVAGFVLFFPNYATLLGKPGFYVESLYVRKCYRRQGFGRTLFSAVARQAAKMGYGKVDWVVLDWNVNALKFYEEMGADIIAEHRFCRLTGEALKALEALIKNVG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2989 227 Pfam Acetyltransferase (GNAT) family 121 199 IPR000182 GO:0016407
Ssu7g2989 227 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 222 IPR000182 GO:0016407
Ssu7g2989 227 CDD NAT_SF 125 180 - -
Ssu7g2989 227 Gene3D - 19 224 - -
Ssu7g2989 227 PANTHER DIAMINE N-ACETYLTRANSFERASE 17 220 - -
Ssu7g2989 227 PANTHER ACETYLTRANSFERASE NATA1-LIKE-RELATED 17 220 IPR039534 GO:0016747
Ssu7g2989 227 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 214 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2989 Ssu-Chr7 67215510 67216193 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu7g2989 Acetyltransf_1 7.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2989 K22883 - gmx:100782562 294.664