Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2988 ATGGCCGCGGCAGCACCGCCACTGGAAACCGCCCCATTGGGTCACCCCCTCTTCAAGCGCGTCCGCCTGGCCACCCCCTCGGACGTGCCCCACATCCACAAACTAATCCACCAGATGGCCGTCTACGAAGGCCTCAGCCACCTCTTCTCCGCCACCGAGCCCTCCCTCTCCGCCACCCTCTTCTCCCCCACCCACCACCCCTTCCGATCCTTCACGATCTTCCTTATAGAAGTTTCCCCCAACCCCTTCGCCGATTCCCTCTTCGACGCCAACCCTTTCTACAAACCCACGGTTGAAGTCGCGAACTTGGACCGCCCGATCCATGACCCAGAAAGGGAAACGTTCAAGTCCCCTCACGGAAACGACGTTTGCGTTGCCGGGTTTGTGTTGTTTTTCCCTAACTACGCTACCCTTCTAGGGAAGCCCGGGTTTTACGTGGAGAGCTTGTATGTGAGGAAGTGTTACAGAAGGCAGGGGTTTGGCAGAACGTTGTTCTCTGCGGTGGCAAGGCAAGCGGCGAAGATGGGGTACGGAAAGGTCGATTGGGTTGTGCTTGATTGGAATGTTAATGCCCTCAAGTTTTATGAAGAGATGGGTGCTGACATCATAGCGGAACATAGGTTTTGCAGGTTGACTGGGGAGGCTCTTAAGGCCTTTGGAGGCGCTGATTAA 672 0.564 MAAAAPPLETAPLGHPLFKRVRLATPSDVPHIHKLIHQMAVYEGLSHLFSATEPSLSATLFSPTHHPFRSFTIFLIEVSPNPFADSLFDANPFYKPTVEVANLDRPIHDPERETFKSPHGNDVCVAGFVLFFPNYATLLGKPGFYVESLYVRKCYRRQGFGRTLFSAVARQAAKMGYGKVDWVVLDWNVNALKFYEEMGADIIAEHRFCRLTGEALKAFGGAD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2988 223 PANTHER DIAMINE N-ACETYLTRANSFERASE 17 222 - -
Ssu7g2988 223 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 214 IPR016181 -
Ssu7g2988 223 CDD NAT_SF 125 180 - -
Ssu7g2988 223 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 223 IPR000182 GO:0016407
Ssu7g2988 223 PANTHER ACETYLTRANSFERASE NATA1-LIKE-RELATED 17 222 IPR039534 GO:0016747
Ssu7g2988 223 Pfam Acetyltransferase (GNAT) family 121 199 IPR000182 GO:0016407
Ssu7g2988 223 Gene3D - 19 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2988 Ssu-Chr7 67196821 67197492 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu7g2988 Acetyltransf_1 7.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2988 K22883 - gmx:100782562 304.293