Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2983 ATGTGTCTAGAGGAGTTGATACCATCAAGCAATCCCAACTTTTACATGTATTCCATGCTCATCAGAACAGCTCTAGTATTTTCTACACTGCTTGTTGGTCTTGCAGTTCCCTTTTTCGGTTTGGTGATGTCACTGACTGGATCTTTACTCACAATGTTTGTTTCCTTGGTTCTTCCCTGTGCTTGTTTCATAAGCATAAGGGGTGGCAAAATCTCACGCTTTCAGGTAGCACTTTGTGTTACAATTATTACAGTAGGTGTTGTATCAAGTGGTTTTGGATCATACTCAGCCCTCTCCGGGATTATTGAGGAATTGTTTGGATGA 324 0.4105 MCLEELIPSSNPNFYMYSMLIRTALVFSTLLVGLAVPFFGLVMSLTGSLLTMFVSLVLPCACFISIRGGKISRFQVALCVTIITVGVVSSGFGSYSALSGIIEELFG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2983 107 Pfam Transmembrane amino acid transporter protein 10 96 IPR013057 -
Ssu7g2983 107 PANTHER OS05G0424000 PROTEIN-RELATED 1 104 - -
Ssu7g2983 107 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2983 Ssu-Chr7 67042799 67044083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2983 1 105 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.524 5.51e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2983 K15015 - gmx:100798108 166.007