Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2972 ATGGACAGCGCAGAAGAAAACCTACTCACCCAACTCGACTGGGACTCGTTGCTGGACCGGTTACCGGAATTCGACCTCGATGATTTTTTGCAGGACGACGACGACGCCGCTTCTGTTAGCGTCACCGACAAGCCCTCCCCGAACGACCCCGTTCTATCCGAGATCGAGAACTTGCTCATGACCCACGGCGAAAACGACGTCGTCTTCCCGGAAACGCCGTCGTCTGAGTCCGACTACTACAAGCTCCTCGAGGAGATTCTGGTGGAGCCCGAGGAAGGACCCGAAAGTCAGCGTTCCAAGACAGAGTCCGAGGGAGGCTCCGACAAAGACAGAACCGATGACGCCACTCCCGATGAACCCGTGTCCAAGAAATTAAGAAGGCAGTTGAGGAACAGGGATGCTGCTGTGAGATCAAGGGAGAGGAAGAAGTTGTATGTGAAAAACCTTGAGATGAAGAGTAGGTATTTAGAAGGGGAATGCAGAAGACTGGGGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGGCTTTGCTTGCAATCGCGTGGCGCATTTGGTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAACCTCTGCTGTTGGGTTCCCTGCTGTGGTTCATGGGCATCATATGCCAACTCAGTCTGCCCCTGATGCTGTGGTTGACAGCAGTATTTCCAAGAGAAAACATCGAACAGAAGGGATTAAGAAGGGTAACTCAAAAAGGGCCAGAAAGTAAGATCTTTGAGTGTTTCCAGATGATATCATTTGTAAAGAGTAGAAGATGCCGAGCTTCGAGGACAaagatgaaattcaattttatgatGTTCTAA 849 0.5006 MDSAEENLLTQLDWDSLLDRLPEFDLDDFLQDDDDAASVSVTDKPSPNDPVLSEIENLLMTHGENDVVFPETPSSESDYYKLLEEILVEPEEGPESQRSKTESEGGSDKDRTDDATPDEPVSKKLRRQLRNRDAAVRSRERKKLYVKNLEMKSRYLEGECRRLGHLLQCCYAENHALRLCLQSRGAFGASMTMQESAVLLLEPLLLGSLLWFMGIICQLSLPLMLWLTAVFPRENIEQKGLRRVTQKGPESKIFECFQMISFVKSRRCRASRTKMKFNFMMF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2972 282 MobiDBLite consensus disorder prediction 88 136 - -
Ssu7g2972 282 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 141 IPR004827 GO:0003700|GO:0006355
Ssu7g2972 282 SUPERFAMILY Leucine zipper domain 123 179 IPR046347 GO:0003700|GO:0006355
Ssu7g2972 282 CDD bZIP_HY5-like 124 175 - -
Ssu7g2972 282 Gene3D - 122 182 - -
Ssu7g2972 282 SMART brlzneu 119 183 IPR004827 GO:0003700|GO:0006355
Ssu7g2972 282 PANTHER BZIP TRANSCRIPTION FACTOR 60 10 281 - -
Ssu7g2972 282 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 10 281 - -
Ssu7g2972 282 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 121 163 IPR004827 GO:0003700|GO:0006355
Ssu7g2972 282 Pfam bZIP transcription factor 122 163 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2972 136 282 bZIP Transcription Factor Family AT1G42990 46.309 1.51e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu7g2972 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2972 - - pvu:PHAVU_007G247600g 429.098