Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2967 ATGGCAACAGAAGAGGGTGGAGAAGGTATTGTGAGGTCAGTGAGTGATGGAAGGAGGAGTTTTTCATCACCCAGCAGGACAAGTTGGGCCTCAGCAAGCTTTCATGACGCAGTGAGTGGAGAGAGTGATGTGTTTCTGAGATGTGGAAGGGAAATAGATGAAGAGGAGGAGCTGAAGTGGGCAGCTTTGGGGAGGCTTCCAACATATGATAGGATGAGGAAAGGCATCCTCAAACAAGTTTTGGATAATGGAAGAGTTAACTATGAAGAGGTTGATATCACTAAGCTTGGAGTGCAGGAAAAGAAGCATCTCCTTGAGAGCATACTAAAGACTGCTGAAGAGGACAATGAGAGTTTCCTGCATAGGATGAGGGAGAGGATTGATAGGGTAGGAATTGAAATTCCCAAGATTGAAGTCAGGTTTGAGCATTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGGGCACTGCCAACACTGCTCAATTCTACCCTGAATGTAATAGAAGGAGCTCTGGGCTATGTCAAGCTTTTGCCTCACAATAAAAGGGTTGTCAAGATTCTCGAAGATATCAGTGGAATTGTGAAACCATCAAGAATGACTCTGCTTTTGGGACCTCCGGGGTCAGGAAAAACTACACTCCTGCAGGCACTTTCTGGAAAAATGGACAAGGATTTAAGGGCATCAGGAAGAGTCACTTACTGTGGTCACGAATTGTCAGAGTTTGTTCCTCAAAGAACATGTGCTTATGTTAGTCAGCATGATCTCCACCATGGAGAGATGACAGTGAGGGAGACACTGGACTTTTCTGGACGCTGCCTGGGAGTTGGAACAAGGTATGATATGCTGGCAGAGTTGTCGAGACGTGAACTGGCAGCAGGCATTAAACCAGATCCTGAGATAGATGCTTTCATGAAAGCCACAGCAATGGAAGGTCAAGAAACAAGTCTTGTGACAGATTACATTCTAAAGATTCTTGGGTTGGAAATATGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTTTAACTACTGGTGAGATGTTGGTAGGCCCTGCAAAAGCATTCTTCATGGATGAAATTTCAACTGGTTTGGATAGTTCTACAACATTCCAAATTGTCAGATTTATGAGGCAGATGGTCCATACCATGGATGTTACGATGATAATCTCTCTTCTGCAACCTGCACCAGAAACATATGACCTTTTTGATGACATAATATTACTTTCAGAAGGTAAGATTGTCTATCAAGGTTCCCGTGAGAGCGTTCTGCATTTTTTTGAGAGTGTGGGGTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTTTACAGGAGGTAACTTCCAAAAAGGACCAAGAACAGTACTGGTTCAGAAGGGACATACCTTACCAATATGTCAGTGTGCCTGAATTTGTAGCCCATTTCAACAATTACAGCATCGGTCAGCAACTTCATGAAAAGATTCAAGTTCCATTTGATCCCAATGAAAGCCATCATGCTGCGTTAGTGAAGGAAAAGTATGGCATCTCCAAATGGGAACTCTTCAAGGCATGCTTCTCAAGAGAGTGGCTTTTGATGAAGCgcaactattttatatatatattcaagacTTCTCAGATTGCTATAATAGCTATAATTACCATGACAGTATTTTTTAGAACAGAAATGAAGCCAGGTCAACTTGAAGGTGCAGGAAAATATTATGGTGCACTATTTTTTAGCCTCATCAATGTAATGTTCAATGGGGTGGCGGAGCTTGCAATGACCATTAATAGACTTCCTGTTTTTTACAAGCAGAGAGATTTCCTGTTTTATCCAGCATGGGCTTTTGCATTGCCCATCTGGGTCCTCAGAGTTCCTCTCTCTCTATTGGAGTCAGGATTATGGATCATCCTCACTTATTATACTATTGGCTTTGCTCCTGCAGCTAGCAGGTTCTTTTGTCAATTATTGGCATTCTTCTCTGTGAATCAAATGGCTCTATCCCTATTCCGCTTCATTGCTGCAGTTGGAAGAACAAAAGTTGTGGCAAACACACTTGGTTCCTTTACAATTTTAGTTGTTTTCGTACTAAGTGGATTTACTGTTTCAAGAAATGATATTGAACCATGGATGATATGGTGCTATTATGGTTCACCTATGATGTATGGTCAAAATGCCATAGCCGTCAATGAGTTTCTAGACAAAAGATGGAGTGCTCCCAATATTGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTTTTCTTAAGGCCAGAGGCATATTTACAGAAAACTATTGGTACTGGATATCTGTGGGTGCCCTTATAGGATTTTCTCTGCTTTTCAACATTTGTTTCATTCTGGCTCTAACTTATTTGAATCCATTTGGAAACTCTAAATCTACTATAGTGGAAAAGGAAGACCAAAAGAAAAGCACATCTGCTTCATCCTCAGTGGAAAAAATGGCGACAGCAACTACAGAGCAGAAATCAGCTTCAATTGCTAAATTGTTTGAAgGTATTGATATGGAAGTAAGAAACACAGCACATAGCTCAATTCCTAAAGCTGCAGAGAATACAAAATCCAAGAAGGGAATGGTGCTGCCCTTTCAGCCTCTGACACTTGcatttcaaaatgtgaattaTTACATCGATATGCCACATGAAATGAAGAAACAAGGAATTGAAGAGAATAGACTCCAACTACTAAGAGATATAAGTGGTGCTTTCAGGCCTGGGATTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACTGGAGGTTATATTGAGGGAAGCATCAGCATATCTGGTTATCCAAAAAACCAGGCAACCTTTGCTCGGATCAGTGGTTATTGTGAACAAAATGATATCCACTCCCCAAATGTTACAGTCTACGAATCGCTTCTGTTTTCTGCTTGGCTGCGTCTCAGTAAGGAGGTTAATAAGGAAACACGAAAGATGTTCATTGAAGAAATTTTAGAGCTGGTTGAGCTCCACACAGTGAGGCATTTTATAGTAGGCCTTCCTGGGATAAATGGCTTATCAACAGAGCAGAGAAAGAGGCTTACCATTGCTGTTGAATTGGTTGCAAATCCTTCCATTATTTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGTCGAACTGTTGTCTGCACAATTCATCAACCAAGCAttgatatatttgaaaattttgatgagCTGCTTTTGATGAAGAGAGGTGGACACGTGATATATGGTGGTCCTCTTGGTCGAAATTCTCAGAATCTTATTGAGTACTTTGAGGCCACTATAGGAGTTCCTAAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCACTTCTCCTGCTGTTGAGTCTCAGCTTAATATAGACTTCACAGAATTATATACTAAGTCAGACCTTTACCAAAAGAACCAGGAACTTATTAAGGAACTATGCACACCAGTACCTGGAACAAAGGACCTTTACTTTCCATCCAAATACTCGCGATCATTTTTTACTCAATGTAAAGCTTGCTTCTGGAAACAATACTGCTCCTATTGGAGGAATCCACAGTATAATGCCGTCAGATTCTTCATCACAATAGCTATTGGTGTCATTTTTGGACTTATTTATTGGGACAAAGGAAAAAAGACGCAAAAGGAACAAGACCTGTTGAATCTCCTAGGAGCTATGTATGCATCTGTTTTTTTCCTTGGAGCCTCCAACACTAGCAGTGTTCAACCTGTTGTTGCAATAGAAAGAACAGCTCTATACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCTTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTTGAACCACATGCTGAAAATTTCTTGTGGTTCTTCTACTTCATATTCATGTCTTTTTTGTACTTCACACTGTATGGAATGATGACTGTAGCTCTGACACCAAACCATCAAATTGCTGCAATTGTTATGTCCTTCTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTTCTTATCCCAAGAATGCAAATTCCAAAATGGTGGAGGTGGTATTATTGGGGATCCCCTGTGGCTTGGACTATATATGGATTGGTCACATCCCAAGTGGGTAACAAAAAGAGTCCAATACAGGTTCCTGGCTTTAGACCCATGACAGTAAAAGATTACCTTGAGAGGCAGTTGGGCTTTCAACATGACTTCCTTGGAGTTGTTGCATTAACTCATGTTGCCTTTGGCCTCCTCTTCCTTATTGTATTTGCATATGGCATCAGGTTCCTAAACTTCCAGAAAAGATAA 4443 0.4072 MATEEGGEGIVRSVSDGRRSFSSPSRTSWASASFHDAVSGESDVFLRCGREIDEEEELKWAALGRLPTYDRMRKGILKQVLDNGRVNYEEVDITKLGVQEKKHLLESILKTAEEDNESFLHRMRERIDRVGIEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTLNVIEGALGYVKLLPHNKRVVKILEDISGIVKPSRMTLLLGPPGSGKTTLLQALSGKMDKDLRASGRVTYCGHELSEFVPQRTCAYVSQHDLHHGEMTVRETLDFSGRCLGVGTRYDMLAELSRRELAAGIKPDPEIDAFMKATAMEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRLTTGEMLVGPAKAFFMDEISTGLDSSTTFQIVRFMRQMVHTMDVTMIISLLQPAPETYDLFDDIILLSEGKIVYQGSRESVLHFFESVGFKCPERKGVADFLQEVTSKKDQEQYWFRRDIPYQYVSVPEFVAHFNNYSIGQQLHEKIQVPFDPNESHHAALVKEKYGISKWELFKACFSREWLLMKRNYFIYIFKTSQIAIIAIITMTVFFRTEMKPGQLEGAGKYYGALFFSLINVMFNGVAELAMTINRLPVFYKQRDFLFYPAWAFALPIWVLRVPLSLLESGLWIILTYYTIGFAPAASRFFCQLLAFFSVNQMALSLFRFIAAVGRTKVVANTLGSFTILVVFVLSGFTVSRNDIEPWMIWCYYGSPMMYGQNAIAVNEFLDKRWSAPNIDPRIPEPTVGKAFLKARGIFTENYWYWISVGALIGFSLLFNICFILALTYLNPFGNSKSTIVEKEDQKKSTSASSSVEKMATATTEQKSASIAKLFEGIDMEVRNTAHSSIPKAAENTKSKKGMVLPFQPLTLAFQNVNYYIDMPHEMKKQGIEENRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSKEVNKETRKMFIEEILELVELHTVRHFIVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFENFDELLLMKRGGHVIYGGPLGRNSQNLIEYFEATIGVPKIKDGYNPATWMLEITSPAVESQLNIDFTELYTKSDLYQKNQELIKELCTPVPGTKDLYFPSKYSRSFFTQCKACFWKQYCSYWRNPQYNAVRFFITIAIGVIFGLIYWDKGKKTQKEQDLLNLLGAMYASVFFLGASNTSSVQPVVAIERTALYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGFEPHAENFLWFFYFIFMSFLYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRMQIPKWWRWYYWGSPVAWTIYGLVTSQVGNKKSPIQVPGFRPMTVKDYLERQLGFQHDFLGVVALTHVAFGLLFLIVFAYGIRFLNFQKR 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2967 1480 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 15 1480 - -
Ssu7g2967 1480 Pfam ABC transporter 907 1058 IPR003439 GO:0005524
Ssu7g2967 1480 Gene3D - 175 473 IPR027417 -
Ssu7g2967 1480 CDD ABCG_PDR_domain2 876 1114 IPR034003 -
Ssu7g2967 1480 SMART AAA_5 916 1108 IPR003593 -
Ssu7g2967 1480 SMART AAA_5 197 422 IPR003593 -
Ssu7g2967 1480 Pfam ABC-2 type transporter 1088 1161 IPR043926 GO:0140359
Ssu7g2967 1480 Pfam ABC-2 type transporter 403 458 IPR043926 GO:0140359
Ssu7g2967 1480 Pfam ABC-transporter N-terminal 112 162 IPR029481 -
Ssu7g2967 1480 CDD ABCG_PDR_domain1 177 427 IPR034001 -
Ssu7g2967 1480 Pfam Plant PDR ABC transporter associated 749 807 IPR013581 -
Ssu7g2967 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 172 445 IPR003439 GO:0005524
Ssu7g2967 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 1115 IPR027417 -
Ssu7g2967 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Ssu7g2967 1480 Pfam ABC-2 type transporter 524 736 IPR013525 GO:0016020|GO:0140359
Ssu7g2967 1480 Pfam ABC-2 type transporter 1204 1416 IPR013525 GO:0016020|GO:0140359
Ssu7g2967 1480 Pfam ABC transporter 188 370 IPR003439 GO:0005524
Ssu7g2967 1480 MobiDBLite consensus disorder prediction 1 27 - -
Ssu7g2967 1480 MobiDBLite consensus disorder prediction 808 828 - -
Ssu7g2967 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 879 1131 IPR003439 GO:0005524
Ssu7g2967 1480 PANTHER ATP-BINDING CASSETTE TRANSPORTER 15 1480 - -
Ssu7g2967 1480 Gene3D - 891 1126 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2967 Ssu-Chr7 66302071 66316950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2967 904 1109 Calmodulin-binding Proteins AT2G36910 25.893 1.97e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2967 K08711 - gmx:100788067 2681.75