Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2960 atgaaaataaaaatgccaacaacctcaagaaggcAAAATCCACCCGAGTTGGCCGGCCCGATGCGTGGGAGAAAACCGAGTTCCTCCAACAGCGAACGATCAAATTCCTTCATCAACACGGAGGAGTACGTCTCACCAGAGGTCATGCGCGACAGCGGGCACGAGTTCGCCATGGACTTGTGGGCCCTCGGGATACTAATCTACGAAATGCTTTACGGTGTGACTCCGCTTAAGGGCAAGAACCACAAGGAGATGTTTCGGAACGTTCTCACGAAGCCGCCAGAGCTCGTTGGAAAGGGTTCGGCATTGATGGACCTTGTTAAGAGGTTGTTGGAGAAGGAGCTGACGAAGCTGGAGGGGTGA 363 0.4931 MKIKMPTTSRRQNPPELAGPMRGRKPSSSNSERSNSFINTEEYVSPEVMRDSGHEFAMDLWALGILIYEMLYGVTPLKGKNHKEMFRNVLTKPPELVGKGSALMDLVKRLLEKELTKLEG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2960 120 Pfam Protein kinase domain 30 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2960 120 MobiDBLite consensus disorder prediction 24 39 - -
Ssu7g2960 120 PANTHER FLIPPASE KINASE 1-RELATED 20 117 - -
Ssu7g2960 120 SUPERFAMILY Protein kinase-like (PK-like) 30 115 IPR011009 -
Ssu7g2960 120 Gene3D Transferase(Phosphotransferase) domain 1 30 116 - -
Ssu7g2960 120 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2960 120 MobiDBLite consensus disorder prediction 1 39 - -
Ssu7g2960 120 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 20 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2960 Ssu-Chr7 66129664 66130026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2960 18 120 AGC Kinase Gene Family AT1G51170 59.223 1.28e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu7g2960 Pkinase 8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2960 - K08286 gmx:100785281 133.65