Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2953 ATGGCAAACATTTTTCAACCATGCCATGACCATGATCCAGCTGCATCCCCCAGCAAGGCCAACAACCCTCCAAAGATGTTGGACCTGGAGGGACCGAGAGAGGAGAAGGGTTTTGACTATGCCAAGAGGGCACAGTGGCTTAGAGCTGCTGTCTTGGGTGCCAATGATGGGCTGCTCTCAACAGCATCCCTCATGATGGGAGTTGGAGCTGTGAGGGAGGATGTTAAGACCATGATACTATCTGGGGTTGCGGGTTTGGTGGGTGGAGCCTGCAGCATGGCCATTGGGGAGTTTGTTTCTGTTCACTCACAGTATGATATTGAGCTGGCTCAGATGAAAAGAGAGGGAAACATGGATCAGGAAGAGAAATTGCCAAACCCCTACTATGCTGCTTTTGCCTCTGCCCTTGCGTTTGCCCTTGGGGCAGGGGTGCCACTACTCGGTGCGGCGTTTGTCAAAAGTTATAAGCTGAGGTTGGGGGTGATGGTGGCTGTTGTGAGCCTTGCCTTGATTGGGTTTGGAAGTTTGGGTGCCTTTTTAGGAAAAGCACCTATGGTGAAGTCCAATTTGAGGGTTTTGATTGGAGGATGGATGGCCATGGCAATTACCTTCGGTTTAACAAAGCTTGTAGACCATACTGCAGTTTGA 648 0.5046 MANIFQPCHDHDPAASPSKANNPPKMLDLEGPREEKGFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVREDVKTMILSGVAGLVGGACSMAIGEFVSVHSQYDIELAQMKREGNMDQEEKLPNPYYAAFASALAFALGAGVPLLGAAFVKSYKLRLGVMVAVVSLALIGFGSLGAFLGKAPMVKSNLRVLIGGWMAMAITFGLTKLVDHTAV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2953 215 Pfam VIT family 47 115 IPR008217 GO:0005384|GO:0030026
Ssu7g2953 215 Pfam VIT family 111 207 IPR008217 GO:0005384|GO:0030026
Ssu7g2953 215 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 6 212 - -
Ssu7g2953 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 6 212 IPR008217 GO:0005384|GO:0030026
Ssu7g2953 215 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2953 Ssu-Chr7 65802180 65802827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2953 19 210 Nodulin-like Gene Family AT3G43660 71.503 1.26e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2953 K22736 - gmx:100811713 307.375