Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2944 ATGGCATCTTCCAAACTGCATGCTGGAGAAAATGTTGGAAGTTATTGGAGAAACACCGAAGGCTTCACCCTTCAAGTCCTTACAGGGCGTTGGTTCATGGTATTCTCCTCGTTCATGATTATGTCCGTATCAGGAGCAAGCTACATGTTTAGTCTATACTCAAGGGAAATCAAGTCAGTTTTGGGGTATGACCAATCTACCCTCAATCTCTTAAGCTTCTTCAAGGACTTGGGGGCTAACATAGGCATCATTTCAGGCCTAATCAATGAGGTCTCACCCCCTTGGGTGGTCATAACAATGGGTGGGGTTCTCAATTTTTTTGGGTATTTCATGGTTTGGCTTGCTGTGGCCAGAAAAATTGCCAAGCCCCAAGTGTGGAACATGTGCTTGTACATCTTCATTGGAGCCAATTCTCATTGCTCCACCAACACTGGAGTTGTCGTCACCAGTGTAAAGAACTTCCCTGGCACCCGGGGCATTGTAATTGGCCTTTTGAGTGGGTATCTAGCTTTGAGTGCAGCTATCATCACTCAGATATACTATGCCTTCTATGGAAATGACTCCAAGTCTCTAATTTTGCTTATGGCGTGGCTACCAACTGctgtaacttttgtttttttaccaATTATCAGGCACCACAGGGGAGTTCAACAGCCAAATGATTCCAAGGCTTTCTATAATTTCCTCTATACCACTTTAGTCCTTGCAGGGTTCCTCATGGAACAAAAGATTTGGAAGAGGAAACAAGAACGCATCAATAGTGAAAACCCTCCTAAGCCTTTGAATATAACTACAGAGATGCCAAATCTAGAGAAATCTGCACAGGCTCCACAAAAGCAAGTTTCCTGTTGGAAAAACATGTTCAAGCCCCCAAGTAGAGGTGATGATTATACAATACTTCAAGCCCTTTTTAGCCTCGACATGGTATTTCTTTTCTTAGCCACTATTTGTGGACTTGGTGGTTCCCTCACTGTGGTAAATAACTTAAGCCAGATTGGTACATCTTTAGGATATTCGCCACATAGTATAACCACATTCGTGTCCCTTATGGCCATTTGGATCTATATGGGTAAAATTGTACAGGGAGTGGTCTCAGAAATTATCATAGCCAAATTTAAAGTCCCTAGGCCTCTCATACTCACACTGATCCTTATATTACCTTGTGTTGGTTACCTTCTAATTGCTTTCAATGTCCCAAATGGTCTCTATGCAGCCTCAATTATTATTGGGTTCTGCTTTGGGGCAAACTGGCCACTACTATTTTCCATCATATCTGAACTTTTTGGTCTTAAATTTTACTCAACTTTGTATAATGTTGGGTCAGTGGCAAGTCCAATTGGGTCATACTTGTTCAGTGTAAGGGTTGCAGGGCATTTGTATGACAAGGAAGCCACAAGGCAAATGGCGGCATTAGGACTAAAGAGGAAACCTGGGGAGGAGTTGAATTGCAATGGGAGTGATTGTTACAGAATGGCTTTCATTATAATCTCTGCAGCTAGCCTGTTTGGGGCTCTTGTGTCTCTCATCTTGGTGCTAAGGACTAGAGAGTTCTATAAAGGTGACATATACAAGAAATTCAGAGAGGAAGCTAGAACTGCTGAAGCTGAAATTGGTCTGACTCAGAACAAGATTGGACAACCTGCTGCAAATGAAGGCTAG 1659 0.4213 MASSKLHAGENVGSYWRNTEGFTLQVLTGRWFMVFSSFMIMSVSGASYMFSLYSREIKSVLGYDQSTLNLLSFFKDLGANIGIISGLINEVSPPWVVITMGGVLNFFGYFMVWLAVARKIAKPQVWNMCLYIFIGANSHCSTNTGVVVTSVKNFPGTRGIVIGLLSGYLALSAAIITQIYYAFYGNDSKSLILLMAWLPTAVTFVFLPIIRHHRGVQQPNDSKAFYNFLYTTLVLAGFLMEQKIWKRKQERINSENPPKPLNITTEMPNLEKSAQAPQKQVSCWKNMFKPPSRGDDYTILQALFSLDMVFLFLATICGLGGSLTVVNNLSQIGTSLGYSPHSITTFVSLMAIWIYMGKIVQGVVSEIIIAKFKVPRPLILTLILILPCVGYLLIAFNVPNGLYAASIIIGFCFGANWPLLFSIISELFGLKFYSTLYNVGSVASPIGSYLFSVRVAGHLYDKEATRQMAALGLKRKPGEELNCNGSDCYRMAFIIISAASLFGALVSLILVLRTREFYKGDIYKKFREEARTAEAEIGLTQNKIGQPAANEG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2944 552 PANTHER MFS TRANSPORTER 5 244 - -
Ssu7g2944 552 CDD MFS_Mch1p_like 29 504 - -
Ssu7g2944 552 PANTHER MFS TRANSPORTER 254 549 - -
Ssu7g2944 552 Pfam Major Facilitator Superfamily 312 515 IPR011701 GO:0022857|GO:0055085
Ssu7g2944 552 Pfam Nodulin-like 30 248 IPR010658 -
Ssu7g2944 552 SUPERFAMILY MFS general substrate transporter 30 516 IPR036259 -
Ssu7g2944 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 254 549 - -
Ssu7g2944 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 244 - -
Ssu7g2944 552 Coils Coil 523 543 - -
Ssu7g2944 552 Gene3D MFS general substrate transporter like domains 300 519 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2944 Ssu-Chr7 65393222 65394991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2944 20 529 Nodulin-like Gene Family AT2G39210 57.603 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2944 - - gmx:100789645 963.755