Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2939 ATGTTTCTTATTGGGGATAGTACCGGTGGAAATGTTGTTCATGACGTGGCAGCTCAGGCTGGGAGGTTAGAAGCCGAGCCGGTGAGGTTAGCCAGCACAATAGCCTTGCACCCTGGCTTTCTTCGAGCCGAGCCAAGAAGATCATTTTATGAAAAGACGGAAACACCCTTCTTAACACGCAACATGATAAGTAAGTTTATGGATTTGGCTGTGCCCGTGGCTAGTGAAACTACCAAGGACCACCCTATTATAAGCCCGATGGGACTGCAAGCGCCGCCGCTCGCGGCGCTGAATTTGCCGCCGGTGATGGTGGCCGTGGCCGAGGAGGATTTGTTGTTTGACACAGAGATGGAATATTGTGAGGCCATGAAAGCTGCGGGTAAAGAGGTGGAGGTTGTGGTGAGCCATGGGATGGGGCATTGCTTTTATCTTAATAAGATTGCTATGGAGTCGGATCCGAAAACAGCATTAGAAGGTCATAAGCTTATTGAAGCGATTGTTAATTTTGTCGgcaaaaattaa 522 0.4828 MFLIGDSTGGNVVHDVAAQAGRLEAEPVRLASTIALHPGFLRAEPRRSFYEKTETPFLTRNMISKFMDLAVPVASETTKDHPIISPMGLQAPPLAALNLPPVMVAVAEEDLLFDTEMEYCEAMKAAGKEVEVVVSHGMGHCFYLNKIAMESDPKTALEGHKLIEAIVNFVGKN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2939 173 Pfam alpha/beta hydrolase fold 2 143 IPR013094 GO:0016787
Ssu7g2939 173 PANTHER CARBOXYLESTERASE 15-RELATED 1 171 - -
Ssu7g2939 173 SUPERFAMILY alpha/beta-Hydrolases 2 169 IPR029058 -
Ssu7g2939 173 Gene3D alpha/beta hydrolase 1 173 IPR029058 -
Ssu7g2939 173 PANTHER ARYLACETAMIDE DEACETYLASE 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2939 Ssu-Chr7 65181534 65182055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2939 1 144 Carbohydrate Esterase AT5G16080 33.557 2.55e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2939 - - ccaj:109806323 227.254