Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2936 ATGGGAATAGAGATTCTGGAGCCTAACACGTGCATTAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCACCTCCCTCCTTCTTCTTATACTCTCCTCTCGCCTATTGCCCGAGGGGCCGAGAGTGTTGTTTATGAAGGGACTTTGGATGGTGTGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTctgcAAGTTAGATCACCTGGGAATAGCAACACTAATTGCGGCCCATGCAAAGCCACCCAATTACatgtttttcttcaaattatatGAACCTCTGAATCTTGCACAAAAGTTACATGTGGAAGAATGGATCCCAACTCTCAATGATGCGCTTATGATAGCAATGCAGTTAGCAAAGCCTTTGCAATATCTACATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAATCTTTGTCCACACCTCACGGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTACTGAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACACACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACTGATCTTCGTACAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAATTAACAGCAGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCTACTGAGGACTTGGGTATACCGTCAAGATTATTATCAATGATACACAAATGCTGGGATGCAAATCCTAATAACAGACCTGCTTTTGATGACATTGTCAATGAACTTGATTTAATTATGGAGCAGGGTAAGTTAAACAAGGCAGAAGATATTCATATCAGACCCTGTAACTTGTATGTTAATCAACCAGTGGACAAGACCAATCACCTTCAGGCTTACCAAGAGAATTTTAGCTGGTCCACTTGTGGCGAACTTTTGGCCAGGAGTGCCTCTAGTGCAAATGATTCTGGTTTGACAACTAGGTGTGAGTCTTATGACGAGCCTTCAGTATACCACCCAATACTGTCTTGGGGATCTTATGCTACATGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCATATTTGCGATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCAGTTTTGCAGACTTCAGGTTTTATAGGCAGTCCTGCTAATGCACTGGCGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAGTCCAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCGATTGCTGCTCTTATAGTCAGGAACAAGCTGTTTGTTGCTAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCAATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCAGGGGGGCCACATACATTGGCAAGTTGATACTTGGAGGGTCGGTCTTCCTGCACTTCAGGTTACTCGTTCTATTGGTGACGATGATCTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGAGTACCTTATGCACAGAGGATGAATTTCTGGTCATTGCTAGCGATGGCCTCTGGGATGTCATAAGCAGTACGGAGgtcataactataataaaagaCACTGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATTACAGTTATCGTTGTTTTCTTACGTCCTGTATGTACGGCAGAGAGAATTTATTAG 1977 0.4269 MGIEILEPNTCIRGCCTSPSIPLHLPPSSYTLLSPIARGAESVVYEGTLDGVRVAVKKPILSTSEDINKFHKELQLLCKLDHLGIATLIAAHAKPPNYMFFFKLYEPLNLAQKLHVEEWIPTLNDALMIAMQLAKPLQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKNDLKGVSTENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLATEDLGIPSRLLSMIHKCWDANPNNRPAFDDIVNELDLIMEQGKLNKAEDIHIRPCNLYVNQPVDKTNHLQAYQENFSWSTCGELLARSASSANDSGLTTRCESYDEPSVYHPILSWGSYATCGRRETMEDTHFILPHICDEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFIGSPANALAEAFIRTDAAFRKELDSYRKSNRCIQKDWHPGCTAIAALIVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCLQERERVIRQGGHIHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITESTLCTEDEFLVIASDGLWDVISSTEVITIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVCTAERIY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2936 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2936 658 CDD PP2Cc 393 648 IPR001932 -
Ssu7g2936 658 SMART PP2C_4 381 646 IPR001932 -
Ssu7g2936 658 SUPERFAMILY PP2C-like 383 649 IPR036457 -
Ssu7g2936 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Ssu7g2936 658 Pfam Protein kinase domain 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2936 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Ssu7g2936 658 PANTHER - 1 658 - -
Ssu7g2936 658 Gene3D - 384 651 IPR036457 -
Ssu7g2936 658 PANTHER PROTEIN PHOSPHATASE 2C 1 658 IPR015655 GO:0004722|GO:0006470
Ssu7g2936 658 Gene3D Transferase(Phosphotransferase) domain 1 22 344 - -
Ssu7g2936 658 SUPERFAMILY Protein kinase-like (PK-like) 23 335 IPR011009 -
Ssu7g2936 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Ssu7g2936 658 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2936 658 SMART PP2C_SIG_2 406 648 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2936 Ssu-Chr7 65055654 65074247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2936 99 658 PP2C-type Phosphatase Gene Family AT2G40860 63.636 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Ssu7g2936 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2936 - - gmx:100785390 1227.23