Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2934 ATGGGAAAGCCCGGAGAAGAACAACGCCCTCTGCCCTCCACCGTCGCCGCCGAGGATCCGCGGCGGAATGCGGCGGCGCCGGGATCCGCCTTTTCCGTCGGACTCAGATGCCTTGTTGTCTTGCTTTTCTCGGTTGCAGTGTTCCTCTCCGCACTCTTCTGGTTACCCCCATTTGTTCACTTCGCAGATCCCAAGGATCTGCATTTAAATTCAAAGTACAAAGATCATGATATTGTTGCAAGCTTTTATGTGCAGAAGCCAGTTTCTTTGTTAGAAGACAACATCTTGCAGCTTTCTGATGACATTTTTGAAGAGATAGGGGTTCCCTCTACCAAAGTGGTCATCTTGTCTCTAGATCCCTTACCACGGTCAAACAAGACAAAAGTGGTGTTTGCAGTTGATCCTGACAGTAAATATTCAGAAATGTCTGCAGCTGCCATTAGTTTGATAAGAGCATCATTTAAATACTTGGTTATACGTCAGTCATATCTCCAGCTCACTACATCCTTGTTCGGTGTACCCTCCTTTTTTGAGGTGCTGAAATTTAAGGGAGGGATCACTATCATTCCACAACAGAGTGTGTTTCCTCTGCAAACAGTGCAAACTTTATTCAACTTTACTTTGAATTTCTCCATTTATGAAATacaaacaaattttgatgaGCTGACAAGTCAGCTAAAGTCTGGACTACATTTGGCACCTTATGAGAACTTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTAGCTGCTCCTACTATTGTTCAATCATCAGTCCTACTTGCAGTTGGGATTACACCATCAAAGGAGAGGCTAAAGCAACTAGCACAAACCATCATGGGACATCATTCATGGAACCTTGGATTGAATAACACTGAATTTGGTAGGGTTAAGCAGGTTCGACTTTCATCCATCTTGCAACACTCCCTTCATggcagtggtggtagtggctCTGCTTGGTCACCTTCCCCTACCCCTCTGCCTCATTctcaccaccaccgccaccatcatcaccaccaccaccaccaccaccatcaccatcggCACCATAGTCACCACCACAATGCCCATGTATTTCCTGAAACTTCACCTACACTTGCACCTACACCTCCAACTGGGGAAGGTGCTACTTCACCTAAGTTTGGTTCCCCTGCCCCCGCAAGAAGCGTTCCTGCCCCAGGGAGAAGTTCTTATGCTCAACCTCCTAATTGCTGCTTTGGGCATAGAAAGGGATCTCCCCGAAATACTCAAAAAAATGCTCATCTAACACCTGCAGTTGCTCCTACTAATGCTCCACACCATCCTGTTGGTTCACCACAGGTTGGACCCCCAGCACATGCCTTTCATTCTTTAGTTCCTGCTTTGAGTCCTTTACCAAATTTAGTATTTGCACATGCTGAGGCCCCTCCTAAGAATGAACCATCTGCTGAACGTCCTAACACACAGTTTCATGGGCCATCACCATCTTCATCTTCTGCAGGTTGTGTTGGGACTGTTAAATGGACATCTTTAATGTTTTTAGTACTTGTATTACTTGTATAA 1545 0.4227 MGKPGEEQRPLPSTVAAEDPRRNAAAPGSAFSVGLRCLVVLLFSVAVFLSALFWLPPFVHFADPKDLHLNSKYKDHDIVASFYVQKPVSLLEDNILQLSDDIFEEIGVPSTKVVILSLDPLPRSNKTKVVFAVDPDSKYSEMSAAAISLIRASFKYLVIRQSYLQLTTSLFGVPSFFEVLKFKGGITIIPQQSVFPLQTVQTLFNFTLNFSIYEIQTNFDELTSQLKSGLHLAPYENLYVILSNSEGSTVAAPTIVQSSVLLAVGITPSKERLKQLAQTIMGHHSWNLGLNNTEFGRVKQVRLSSILQHSLHGSGGSGSAWSPSPTPLPHSHHHRHHHHHHHHHHHHHRHHSHHHNAHVFPETSPTLAPTPPTGEGATSPKFGSPAPARSVPAPGRSSYAQPPNCCFGHRKGSPRNTQKNAHLTPAVAPTNAPHHPVGSPQVGPPAHAFHSLVPALSPLPNLVFAHAEAPPKNEPSAERPNTQFHGPSPSSSSAGCVGTVKWTSLMFLVLVLLV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2934 514 MobiDBLite consensus disorder prediction 309 448 - -
Ssu7g2934 514 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 511 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 329 356 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 309 326 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 1 21 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 411 425 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 476 495 - -
Ssu7g2934 514 MobiDBLite consensus disorder prediction 470 495 - -
Ssu7g2934 514 PANTHER F20B24.21 1 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2934 Ssu-Chr7 64947317 64953678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2934 33 513 C3H Transcription Factor Family AT3G10810 47.609 4.33e-99 306