Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2924 ATGGGAATCTGCCATGGGAAACCCATTGAGATCCAACAAAGCGAGAGAGAGACCCCAGAATTCCCCAGCGAGCTCCCATCTTCCAGAAACCCCACCAAATCCTCAAAATTCCCGTTCTACAGCCCAAGCCCTTTGCCGAGTTGGTTCAAGAACTCGCCCTCAAACTCGAACCCGAGCAGCGTGAGTTCGACGCCGCTGAGGATCTTCAAGCGCCCCTTCCCCCCTCCCTCGCCGGCCAAGCACATTCGGGCGCTGCTGGCTCGGCGCCACGGCTCGGTGAAGCCGAACGAGGCGTCCATACCCGAAGGGAGCGAGTGCGAGGTTGGGCTCGACAAGAGCTTCGGCTTCGCCAAACAGTTTTCGGCCCATTACGAGCTCAATGAAGAAGTGGGCCGCGGCCATTTCGGATACACCTGCTCTGCCAAAGCCAAGAAGGGGGCCTTCAAGGGCATCGATGTTGCTGTCAAAGTCATCCCAAAAGCCAAGATGACCACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGTGCTCTAACAGGACATAAGAATTTGGTGCAATTCTATGAAGCCTATGAAGATGAGGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGAGAATTGCTAGATCGGATTCTTTCCAGGGGTGGAAAGTACTCAGAGGAGGATGCCAGAGTtgttatgattcaaatattaagTGTGGTAGCTTTTTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAgaattttcttttcacttctAAGGATGAAAATTGCACGTTGAAGGCCATTGATTTTGGATTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGAAGTGCTTATTATGTAGCTCCAGAAGTCTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTATTATGTGGAAGTCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCTGTGCTAAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCTGCCAATGCAAAAGATTTTGTAAAGAGGTTGTTGAATAAGGATTATCGTAAAAGATTGACTGCAGCTCAGGCACTCAGTCATCCGTGGCTGGTGAATCATCATGATGATATAAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGCTCATCTTCTTTACGCAAATCCGCTTTAGGGGCTCTTGCAAAGACTTTAACAGTAGCTCAGCTAGCTTATCTCAGAGACCAGTTTACTCTGTTAGGGCCAAACAAAAGTGGGTTAATCTCTATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTGAACATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCGGCTATAAGTGTGCACCAACTTGAGGGCATGGAGAGCTGGGAGCAACATGCAAGGCGTGCCTATGAGCTTTTTGAAAAGGATGGAAATAGACCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCAGTACCTGTTCATGTAGTACTTCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGGCTTCTGCATGGGGTTTCTTCTCGCGCATTTCAGAAGGCTTGA 1737 0.4577 MGICHGKPIEIQQSERETPEFPSELPSSRNPTKSSKFPFYSPSPLPSWFKNSPSNSNPSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFAKQFSAHYELNEEVGRGHFGYTCSAKAKKGAFKGIDVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDEDNVYIVMELCKGGELLDRILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENCTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSANAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDIRIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVAQLAYLRDQFTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRAFQKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2924 578 Gene3D Phosphorylase Kinase; domain 1 117 213 - -
Ssu7g2924 578 SUPERFAMILY EF-hand 416 569 IPR011992 -
Ssu7g2924 578 Pfam Protein kinase domain 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2924 578 MobiDBLite consensus disorder prediction 1 75 - -
Ssu7g2924 578 CDD STKc_CAMK 123 385 - -
Ssu7g2924 578 ProSiteProfiles Protein kinase domain profile. 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2924 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Ssu7g2924 578 MobiDBLite consensus disorder prediction 16 66 - -
Ssu7g2924 578 PANTHER CDPK-RELATED KINASE 1 25 573 - -
Ssu7g2924 578 Gene3D - 408 569 - -
Ssu7g2924 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 573 - -
Ssu7g2924 578 SMART serkin_6 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2924 578 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Ssu7g2924 578 SUPERFAMILY Protein kinase-like (PK-like) 123 408 IPR011009 -
Ssu7g2924 578 Gene3D Transferase(Phosphotransferase) domain 1 214 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2924 Ssu-Chr7 64484994 64491045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2924 1 576 EF-hand Containing Proteins AT3G50530 66.667 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ssu7g2924 Pkinase 6.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2924 - - gmx:100796678 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2924 7 64484994 64491045 Ssu7g2924 7 64484994 64491045 ECH