Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2921 ATGGGCCCAGACTGTGAGCGAGTGGATGAATATCGTCTTGGCCCCAGGGAGAGTTTGGCTGAAGCTGTAAATGCCTTCATTAATCTTCATGGTATGCAGCCTTGTGAGATATGTGCCATGAGTTTGAGAGGTTCAGCACCTACTTGGGTGATCTTAAGGTTGCTGTCTTTTATGTTGGCTTGCCATGATAAGCAGGTTATGATGTTTTCTGCAACACTCAGCAAGGAAATTCACCTAGTctgcaaaaagaagaaaaaaataaaaaatgcaagatGTAATGTCCCTGCATTTTACATAATGCATGCATTCCCGGTAGCATTTTAG 324 0.3981 MGPDCERVDEYRLGPRESLAEAVNAFINLHGMQPCEICAMSLRGSAPTWVILRLLSFMLACHDKQVMMFSATLSKEIHLVCKKKKKIKNARCNVPAFYIMHAFPVAF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2921 107 Gene3D - 1 84 IPR012295 -
Ssu7g2921 107 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 2 41 IPR009028 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2921 Ssu-Chr7 64295568 64296853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2921 57 83 Eukaryotic Initiation Factors Gene Family AT5G11170 77.778 1.95e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2921 K17267 - ini:109161804 69.707