Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2919 ATGGAGAGAGGAGAATTCCAGGTGAAGGTTGTTAAGCAGATCTTATGGGTAAATGGAATGAGGTATGAACTAAAGGAGATATATGGTATTGGAAATTCAGTGGAGGTGACTTGGATGGGAATGACCCAGGAAAAGAGTGCGTTATATGCTTGTCAGAGCCTTGGGACATAA 171 0.4211 MERGEFQVKVVKQILWVNGMRYELKEIYGIGNSVEVTWMGMTQEKSALYACQSLGT 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2919 56 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 2 46 - -
Ssu7g2919 56 PANTHER MAHOGUNIN 2 46 IPR045194 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2919 Ssu-Chr7 64293083 64293253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2919 2 35 C3H Transcription Factor Family AT3G09770 73.529 2.93e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2919 - - gmx:100789032 69.707