Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2915 ATGGTGATGCGCTTGGTTCCTCTGTTCAACCGTGTTTTGGTTGAGAAAATCATCCGTCCATCAAAAACCAACACTGGGATTCTGTTGCCAGAAACGTCCGCCAAGTTGAATTCTGGAAAAGTTATTGCTGTTGGTCCTGGAGTTCATGACGAGGAAGGGAAGCTAATTCCTGTGGCTATAAAGAAAAGTGACGCTGTCCTTTTACCTGAATATGGAGGGACTGAGCACTTGAACTTCGACAGCTTTTGCTGTGGGTGCCCTATGATGATGGCGTTTGCTTCATTTTTCTGTAGTTCTGTCTCGGATGCTGATATGACTCTGATATCCACGAACACACACATACCTATAATACAGTGTTTTCTGGTCCAACACTCCAACTTTCTATCAGTTTCCTTTGTTGATTCATCGTTGTTGTTGAAATACTGCAAAGTGGTGGGCTTTTGTACTAAACAGATGTATCATCTATTCCGAGATGAAGATATACTGGGGACACTGCATGATTGA 504 0.4286 MVMRLVPLFNRVLVEKIIRPSKTNTGILLPETSAKLNSGKVIAVGPGVHDEEGKLIPVAIKKSDAVLLPEYGGTEHLNFDSFCCGCPMMMAFASFFCSSVSDADMTLISTNTHIPIIQCFLVQHSNFLSVSFVDSSLLLKYCKVVGFCTKQMYHLFRDEDILGTLHD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2915 167 SMART Cpn10_2 4 80 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 Pfam Chaperonin 10 Kd subunit 5 75 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 PANTHER BNAA08G31360D PROTEIN 1 75 - -
Ssu7g2915 167 CDD cpn10 4 75 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 75 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu7g2915 167 SUPERFAMILY GroES-like 3 80 IPR011032 -
Ssu7g2915 167 Gene3D GroES chaperonin 1 81 IPR037124 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2915 Ssu-Chr7 64113240 64115661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2915 5 80 Calmodulin-binding Proteins AT5G20720 41.558 1.22e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2915 K04078 - zju:107431513 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2915 7 64113240 64115661 Ssu7g2915 7 64113240 64115661 ECH