Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2914 ATGCTGTCTCATTCATGTGTTATGATTgcaacattaatattatttgttatagcACAAAGTGTTGTGGGAGTGAATTCACTTTCAGAAGTAGATAAGATAAGCACTTTGCCAGGACAGCCACCAGTCAAATTCCAGCAATATGCTGGTTACATTACAGTGGATGAGAAGCACAAAAGAGCGTTGTTTTACTACTTTGTTGAAGCTGAAGTAGAACCAGCTTCAAAGCCGCTGGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAATGGtcttttgaaaaatgaatataGTTGGAACATAGAGGCAAATATGCTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGACTTTGTGAACGATGAAATAACAGCAAGGGACAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCAGAGttcaaaaacaatgatttcttTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTTTGGAATTTAACATGGATTTCAACTCCAGAGCTGAATTTTTCTGGTCACATGGACTGATATCAGATTCAACTTATGAAATCTTCACTGAAGTATGCAACTATTCCCAAATTAGGAGACAACATGAAAGTGGGACACTTACCCCCATTTGTGCAGGAGTAAATAGGCTAGTGTCAACGGAAGTTAGTAGATATATTGATACATTTGATGTTACTCTTGATGTGTGTCTTTCATCAGCAGATCAACAGGCTTATGTGCTGAATCAACTGACTCAACTGCAAGAGGGAGGGAAGATAGATGTTTGTGTGGAAGATAAAACTATCACATACTTGAATAGGAAAGATGTGCAGGAAGCTCTCCATGCTAAGCTGGTAGGAATCACCACATGGTCAACTTGCAGCGATGTTCTCAAATATGACATGCAGAATCTAGAGATCCCAACCATTTCTATTCTGGGTGCACTTGCAAAGTCAGGTATCAGGGTTCTGGCATATAGTGGAGATCAAGATTCAGTCATCCCATTACTTGGGACAAGATCCCTGGTAAATGGATTAGCCAAGGACTTTGGACTCAACACAACAGTGCCCTATAGAGCCTGGTTTGAGGGAAGACAGGTGGCTGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCCACCATAAGAGGAGCAGCCCATGAAGCTCCATTTTCCCAACCAGAAAGGTCACTGGTGCTGCTAAAAGCATTTTTGGAAGGAAAGCCACTTCCAGAACCATTCTTTTAA 1392 0.403 MLSHSCVMIATLILFVIAQSVVGVNSLSEVDKISTLPGQPPVKFQQYAGYITVDEKHKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLLKNEYSWNIEANMLYLESPAGVGFSYSANKSFYDFVNDEITARDNLVFLQRWFTKFPEFKNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNMDFNSRAEFFWSHGLISDSTYEIFTEVCNYSQIRRQHESGTLTPICAGVNRLVSTEVSRYIDTFDVTLDVCLSSADQQAYVLNQLTQLQEGGKIDVCVEDKTITYLNRKDVQEALHAKLVGITTWSTCSDVLKYDMQNLEIPTISILGALAKSGIRVLAYSGDQDSVIPLLGTRSLVNGLAKDFGLNTTVPYRAWFEGRQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLVLLKAFLEGKPLPEPFF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2914 463 Gene3D alpha/beta hydrolase 28 285 IPR029058 -
Ssu7g2914 463 SUPERFAMILY alpha/beta-Hydrolases 35 459 IPR029058 -
Ssu7g2914 463 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Ssu7g2914 463 PANTHER CARBOXYPEPTIDASE 17 461 - -
Ssu7g2914 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 461 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 Gene3D - 310 345 - -
Ssu7g2914 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 Pfam Serine carboxypeptidase 37 455 IPR001563 GO:0004185|GO:0006508
Ssu7g2914 463 Gene3D - 357 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2914 Ssu-Chr7 64107819 64110968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2914 318 458 Calmodulin-binding Proteins AT2G22960 29.787 3.76e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2914 K16297 - gmx:100805028 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2914 7 64107819 64110968 Ssu7g2914 7 64107819 64110968 ECH