Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2911 ATGCTTAAATTATTGCAGCCCTATGGATTTGATGTAGGCCAACCTGAGAGGGGAACAATCCATAAAGGGTTGGATTTAGGAGTACAGGGCATGCGAGTAGGAGGCCAGCGACTGCTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGGTTGGCCAATCTTTGGCACGAAGTGACAGTGGAGATGATCAGATATGGAAGGATATTGTTGAAGATATCATGCAGTGGAGATGA 270 0.4556 MLKLLQPYGFDVGQPERGTIHKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIEVGQSLARSDSGDDQIWKDIVEDIMQWR 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2911 89 Gene3D - 4 67 IPR046357 GO:0003755
Ssu7g2911 89 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 6 64 - -
Ssu7g2911 89 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 6 64 - -
Ssu7g2911 89 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 71 IPR001179 GO:0003755
Ssu7g2911 89 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 6 62 IPR001179 GO:0003755
Ssu7g2911 89 SUPERFAMILY FKBP-like 10 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2911 Ssu-Chr7 63512082 63513765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2911 7 88 Calmodulin-binding Proteins AT5G48570 35.227 4.81e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2911 - - vun:114191590 117.472