Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g2853 | ATGGAGGGAGAAAGCGATAAAGGGTTGTTGGAATATGTAAGGAAGTTTTCTCCACCACCCTTCTTATTGAAGACCTATATGTTGGTTGAGGATCCTGCCACCAATGATGTTGTGTCGTGGAATGCTGATGGGACAACGTTTGTGGTGTTGCAACCGGCGGAGTTTGCACGTGATCTTCTCCCAACACTCTTCAAGCACAGCAACTTCTCAAGCTTTGTTCGCCAGCTGAATACCTATggtttTCGTAAAGTTGCAACAAGCAGATGGGAATTTCGCAACGACCGGTTTAGGAAGGGTGAGAAGGAACTACTATGCGAGATTCGGCGTAAAAAAGCATGGGTCAGCAAGCGACAACCCACTATTGCACCAATCCAAACCACACCTCAAGATTCAGATGAAGATCAAAGGTCCTTATCAGCCTCTTCGTCTTCAGGTTATGATACTCTTATGGATGAAAACAAGCGACTCAAAAAGGAGAATGGGGTGTTGAGCTCGGAGCTCACACTCATGAATAGGAAGTGTAGGGAATTGCTTGATTTGGTGGCCAAGTATTCATATGCAAAGGAAGCAGGGGTAGATGAGAGACCAATGTTGTTTCAAGTGAGATTGGAAAGGAGAAAGGGAGATGAAGAAGAGAGCTGA | 642 | 0.4502 | MEGESDKGLLEYVRKFSPPPFLLKTYMLVEDPATNDVVSWNADGTTFVVLQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFRNDRFRKGEKELLCEIRRKKAWVSKRQPTIAPIQTTPQDSDEDQRSLSASSSSGYDTLMDENKRLKKENGVLSSELTLMNRKCRELLDLVAKYSYAKEAGVDERPMLFQVRLERRKGDEEES | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g2853 | 213 | MobiDBLite | consensus disorder prediction | 119 | 149 | - | - | |
Ssu7g2853 | 213 | Pfam | HSF-type DNA-binding | 21 | 110 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2853 | 213 | Gene3D | - | 13 | 111 | IPR036388 | - | |
Ssu7g2853 | 213 | PANTHER | HEAT STRESS TRANSCRIPTION FACTOR B-3 | 5 | 209 | - | - | |
Ssu7g2853 | 213 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 5 | 209 | IPR027725 | - | |
Ssu7g2853 | 213 | Coils | Coil | 146 | 166 | - | - | |
Ssu7g2853 | 213 | ProSitePatterns | HSF-type DNA-binding domain signature. | 60 | 84 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2853 | 213 | MobiDBLite | consensus disorder prediction | 118 | 149 | - | - | |
Ssu7g2853 | 213 | SUPERFAMILY | "Winged helix" DNA-binding domain | 17 | 110 | IPR036390 | - | |
Ssu7g2853 | 213 | SMART | hsfneu3 | 17 | 110 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2853 | 213 | PRINTS | Heat shock factor (HSF) domain signature | 21 | 44 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2853 | 213 | PRINTS | Heat shock factor (HSF) domain signature | 59 | 71 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu7g2853 | 213 | PRINTS | Heat shock factor (HSF) domain signature | 72 | 84 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g2853 | Ssu-Chr7 | 60042830 | 60045988 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g2853 | 18 | 184 | HSF | AT2G41690 | 56.667 | 3.64e-65 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Ssu7g2853 | HSF_DNA-bind | 1.2e-31 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g2853 | K09419 | - | qsu:112013936 | 323.553 |