Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2837 ATGCTGGTGGGAGAGTTACCAATGGAGCTTCAAGGCCTTGAGAGTTTACAGGATTGTCAAATTTTCAACAATCACTTGAGTGGTTTAATACCATCTTGGGTCGGGAATTTGACCAATCTGAGAGTTTTTGCTGGTTATGAGAATAATTTCAATGGAAGGATTCCAGCTACACTGGGGTTCGTTTCTGAGCTTAAAATACTTAACCTGCATTCAAACCACCTTGTAGGCCCAATACCAGGAAGCATTTTTTCTCAAGGGAAGCTTGAAGTTCTAATCCTCACTCAGAACAGTTTAAGTGGTGATCTACCAGAGGAAATTGGGAATTGTCAAACCCTTTTCAGTGTTCGAATTGGCAACAATAATCTAGTAGGTAATATTCCCAAGAGTGTTGGAAATCTAACTGGCCTTGCCTACTTTGAAGCTGACCATAATAATCTTTATGGTGAGCTGATAGCAGAATTTTCTTTGTGTTCTAATCTCATCTTCTTGAACTTGGCTTCAAATGGTTTCACTGGAACAATTCCACCAGAATTTGGACAGCTTATGAACCTGAAGGTGTTAATTCTCTCTGGAAATCGCCTTTTTGGTGATATCCCAGAATCGATTCTGGGGTGCAAGAATCTTAACATGCTTGACATAAGCAATAACAGGTTGAATGGAACAATACCAGATGAAATCTGCAAGATCCCCCAGTTGCAGAACTTGCTGTTGGGTCAGAATTCCATAAGAGGAGTGATCCCTCGTGAAATTGGAAGGTGTCGAAAACTTCTTGAATTGCAATTGGGCAGTAACTATTTGACTGGAACTATTCCTCCTGAGATTAGTTACATGGTGAACTTGGAGATAGCTTTAAATTTGAGCTATAACCATCTTCATGGACCATTGCCCCCTGAATTAGGAAGACTAATCAAACTTTGCTCTCTGGATGTTTCCAACAATCATCTCTCAGGTAATATCCCAGATGCACTTAACGGGATGTCGAACTTGATTGAGATTAATTTGTCAGATAATCAGCTCAGTGGTTCAATTCCAAACTTTAGACCATTCCAGAAGAATCCTGCTTCAAGTTATTTGGGGAACAAAGGGCTTTGTGGGGAGCCATTGAACACTACATGTGGAGGAGATCATCATTATGATCATGAGCCTACGAAATACCAATACCATCCTGGAATTTCTTATGAAGCCATAGTAACTATATTGGGATCATGCTTTGCAGCCTTTTCATCAGTAATTGCAGTTGTCTTTATGATCAGAGTGGGGCAAGAACTAGTTGCAAATGATGCTGTGATAGAAGGTGATGAAACCAATAACAAACCATCTATAATATCAGGAAGGGTTTTTATTAGCAATCTAAGACAAGCAGTAGACCTTGATGCTGTTGTTAAAGCAACTCTGAATGAATCTAATAAGCTTAGCAGTGGCACTTTTAGTACAGTGTACGAGGCATTCATGCCCTCTGGGATAGTCTTACTTGTAAGGAAACTGATGTCTATGGACATGAGAATAATGCACCGCCAGAACAAGGTAATTGGAGAGCTTCGATGGCTGAGCAAACTATGTCATGAAAACTTAATGCAACCCATTggatatgttatttataatgagTTTGTTCTTCTCATTCATCGGTATTTACCCAATGGAACATTGGCTCAACTTCTTCATGAATCTACAAAGCAACTTGGATATCAGCCTGACTGGCCTGCTAGACTATTTATTGCAGTGGGAGTGGCAAAGGGTTTGGCTTTCCTTCATCACTTTGGAATTATCCACCTTGACATTTCTTCTAGGAATGTTCTTCTGGATGCATATTTTAAGCCATTGATTGGGGAGATCGAGTTATCAAAACTTCTAGATCCAACCAAAGGCATTGCTAGTATTAGTGCAGTTTTTGGTTCCATTGGTTACATTCCACCAGAATATGCATATACAATGCGAGTCACAGCACCCGGAAATGTGTATAGCTTTGGTGTCATTCTGCTAGAGATCCTAACAACTCGACCACCAGTTGATGAGGCTTTTGGTGAAGGTGTGGATTTGGTGAAGTGGGTTCATGGAGCTGCAGCAAGAGGTGAATCTCCAGAGCAGATACTGGATGCAAGGCTCAGCACAGTTTCCCATGGTTGGAGGAAAGAAATGCTTGCTGCTCTGAAAGTGGCGTTGCTATGCATTCACCATAGGCCAGCAAAACGACCAAAAATGATAAACGTAGTGGAAATGCTTCGAGAGATAAGGAACAAGCGATAG 2244 0.406 MLVGELPMELQGLESLQDCQIFNNHLSGLIPSWVGNLTNLRVFAGYENNFNGRIPATLGFVSELKILNLHSNHLVGPIPGSIFSQGKLEVLILTQNSLSGDLPEEIGNCQTLFSVRIGNNNLVGNIPKSVGNLTGLAYFEADHNNLYGELIAEFSLCSNLIFLNLASNGFTGTIPPEFGQLMNLKVLILSGNRLFGDIPESILGCKNLNMLDISNNRLNGTIPDEICKIPQLQNLLLGQNSIRGVIPREIGRCRKLLELQLGSNYLTGTIPPEISYMVNLEIALNLSYNHLHGPLPPELGRLIKLCSLDVSNNHLSGNIPDALNGMSNLIEINLSDNQLSGSIPNFRPFQKNPASSYLGNKGLCGEPLNTTCGGDHHYDHEPTKYQYHPGISYEAIVTILGSCFAAFSSVIAVVFMIRVGQELVANDAVIEGDETNNKPSIISGRVFISNLRQAVDLDAVVKATLNESNKLSSGTFSTVYEAFMPSGIVLLVRKLMSMDMRIMHRQNKVIGELRWLSKLCHENLMQPIGYVIYNEFVLLIHRYLPNGTLAQLLHESTKQLGYQPDWPARLFIAVGVAKGLAFLHHFGIIHLDISSRNVLLDAYFKPLIGEIELSKLLDPTKGIASISAVFGSIGYIPPEYAYTMRVTAPGNVYSFGVILLEILTTRPPVDEAFGEGVDLVKWVHGAAARGESPEQILDARLSTVSHGWRKEMLAALKVALLCIHHRPAKRPKMINVVEMLREIRNKR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2837 747 Gene3D Transferase(Phosphotransferase) domain 1 544 747 - -
Ssu7g2837 747 ProSiteProfiles Protein kinase domain profile. 465 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2837 747 SUPERFAMILY Protein kinase-like (PK-like) 464 742 IPR011009 -
Ssu7g2837 747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 588 600 IPR008266 GO:0004672|GO:0006468
Ssu7g2837 747 Gene3D Ribonuclease Inhibitor 115 375 IPR032675 -
Ssu7g2837 747 SUPERFAMILY L domain-like 7 364 - -
Ssu7g2837 747 Pfam Protein tyrosine and serine/threonine kinase 467 739 IPR001245 GO:0004672|GO:0006468
Ssu7g2837 747 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 744 - -
Ssu7g2837 747 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 744 - -
Ssu7g2837 747 Gene3D Ribonuclease Inhibitor 1 107 IPR032675 -
Ssu7g2837 747 SMART LRR_typ_2 326 348 IPR003591 -
Ssu7g2837 747 SMART LRR_typ_2 302 325 IPR003591 -
Ssu7g2837 747 SMART LRR_typ_2 181 205 IPR003591 -
Ssu7g2837 747 SMART LRR_typ_2 61 85 IPR003591 -
Ssu7g2837 747 SMART LRR_typ_2 229 253 IPR003591 -
Ssu7g2837 747 Gene3D Phosphorylase Kinase; domain 1 432 543 - -
Ssu7g2837 747 Pfam Leucine rich repeat 183 242 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2837 Ssu-Chr7 59592393 59595282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2837 1 744 Receptor kinase-like Gene Family AT2G41820 64.257 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ssu7g2837 PK_Tyr_Ser-Thr 7.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2837 - - adu:107492611 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2837 7 59592393 59595282 Ssu7g2837 7 59592393 59595282 ECH