Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2836 ATGCATATTCAAGTGAAGGCAATTCCACCAGTTTTGATCGGAAAAGACGTTCCCGGTGTTGCGAGAACGGGTGCTGGGAACCCGTGCCTTTTTAATTCCAGCTATGGAGTTGTAACGAAACCGTTCAAATATAATTCGCAAACCCTTCGATCGGTTATTGAGGGTTCGTGGAGGAAGGGATATGCTGAGCGCATTGTTGGTTTGCCTTGCTTGGCATCCAAATATCTTGTCGTTTCTTCACATTATGGACTGTATTGTCCTCAGAGAATCGCTAGTGGAGgTCTTGGTTTCTATCTCAGAAACCAGTTCCATTTTTTGTACATCAAGGATGTTGAGAAGCTCTTTGTTCGATCACCAAGGTTACACAATTTGTTCCAAAAGCTAATGAAGACACTTTCAGGGTCAGTGTTAGTAATCGGTTCCCAGATCTTTGATTCTGAAGATGATTGTACAGAAGATGGCGACAATAATGCTCCTACAAAGGAGTTCTTCTGCATCACTCTTAAACAGTTGCAAAGCTTTCCCTGGCTTGTGATTGTCAACATAGGCAGAAACCAAAGACGTCCATCTGCACTCACTGGTGAGTCCTTGCCTGCTTCCAAGAACCCTGGTGATGAAGTCTTCTCTGGCTCCACAGTGAAGCAAAAAGAGATTGAGGCTGTTGTAATTGCTACTGGGCTGCACACCATCTTTGGCAAGTCTGCTCATTTAGTGGACAGCACTAACCAAGTCGACAATCAAAGATTTATATTCAATGTTGGGGAGGTTGGAATGTCTATTGATCCAAAACTTCTTGTTTCAAACTTCCAAGTCATCACAGGGACACTAGGACTCTTAATATGCGGCAAGACtatctttgtttcttctttaaTGGGTCGAATGATTGGGATTTCCCTCATTTCTGCCGTCAGAGTTGGTCTTCTTGCTCCTGGTGGGGACTTTGCTTGTGTTTGTTTTCAACATACAGGCAAAGCTTCAGCTTCAAGTGCAAGTGATTTTTCTCTTGTGTTTTCTAGATATCATGTGTTTTTCTCTTGTGCTTCTGTTTATTCACTTCACCCCCATCCCCTCGCAACTTAA 1080 0.4259 MHIQVKAIPPVLIGKDVPGVARTGAGNPCLFNSSYGVVTKPFKYNSQTLRSVIEGSWRKGYAERIVGLPCLASKYLVVSSHYGLYCPQRIASGGLGFYLRNQFHFLYIKDVEKLFVRSPRLHNLFQKLMKTLSGSVLVIGSQIFDSEDDCTEDGDNNAPTKEFFCITLKQLQSFPWLVIVNIGRNQRRPSALTGESLPASKNPGDEVFSGSTVKQKEIEAVVIATGLHTIFGKSAHLVDSTNQVDNQRFIFNVGEVGMSIDPKLLVSNFQVITGTLGLLICGKTIFVSSLMGRMIGISLISAVRVGLLAPGGDFACVCFQHTGKASASSASDFSLVFSRYHVFFSCASVYSLHPHPLAT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2836 359 PANTHER CALCIUM-TRANSPORTING ATPASE 190 255 - -
Ssu7g2836 359 Pfam E1-E2 ATPase 184 256 - -
Ssu7g2836 359 Gene3D - 166 242 - -
Ssu7g2836 359 SUPERFAMILY Calcium ATPase, transduction domain A 189 238 IPR008250 -
Ssu7g2836 359 PANTHER PLASMA MEMBRANE ATPASE 190 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2836 Ssu-Chr7 59532860 59536936 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2836 190 254 Primary Pumps ATPases AT5G57350 74.242 2.06e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2836 K01535 - gmx:100796279 100.908