Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2819 ATGGGCATGGCAGCCAGACTACTAGCCCTTTCTCTGGTCCTAAATTTCATCCTTCTTCACATGTCTGGTGCTGCTGAATCCACAGTTGTGAAACCACCCATCCCCAACCCAACAACAGAGTTCATCAAGTCCTCATGCGAGTCCACTAGCTCCCCCGTCACATGTGTTCAAAGCCTCTCAAGGTATGCCAGCACAATTCGCCAAAGCGAGCGACTACTAGCCATCACGGCCCTATACGTGAGCGTGTCTAGAACCCGATCATGCGCATCGTTTGTGAAGGTAATGGGCCTGGCGAAGGGGATGAAGCCCATAGAGCATAATGCAATGCAAGACTGCATAGAGCTCATGGATGACAGCGTGGATCGTCTCAGCCAATCAATTAGGGAGCTTGGCCTTTTAGGTAAGGCTGAGGGGAAGGATTTCGAGTGGCACATGAGTAATGTCCAGACTTGGGTTAGTGCTGCCATGACCAATCAGAAAACGTGTCTTGACGAGGTTGATGGGCCCCACGTGGATGCAAACTTGAAGGATGCCATTAAGCCCAGAGTTGTGGACGTTTCTCAAGTCACTAGTAATGCCCTTGCATTGGTTAATCACTTTGCCTCCAAGAACCGTACTACCGCACAAACTAAAATGCCATAA 642 0.4984 MGMAARLLALSLVLNFILLHMSGAAESTVVKPPIPNPTTEFIKSSCESTSSPVTCVQSLSRYASTIRQSERLLAITALYVSVSRTRSCASFVKVMGLAKGMKPIEHNAMQDCIELMDDSVDRLSQSIRELGLLGKAEGKDFEWHMSNVQTWVSAAMTNQKTCLDEVDGPHVDANLKDAIKPRVVDVSQVTSNALALVNHFASKNRTTAQTKMP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2819 213 CDD PMEI-like_3 44 202 - -
Ssu7g2819 213 SMART PMEI_2 37 196 IPR006501 GO:0004857
Ssu7g2819 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Ssu7g2819 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 201 IPR035513 -
Ssu7g2819 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 204 - -
Ssu7g2819 213 PANTHER PECTINESTERASE INHIBITOR 9 19 204 - -
Ssu7g2819 213 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Ssu7g2819 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2819 Ssu-Chr7 58866239 58866880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2819 42 199 Carbohydrate Esterase AT3G14310 26.415 6.91e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2819 - - gmx:100789460 257.299