Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2818 ATGGCAGCACTCACCACTAATACCATCCACGCCTCTCTCTTCGCCACCATTCTTCCAAAGACATCGTTTCAACCCTTCTTCTCCAACCAACTACTCGGCCTCcccttatcttcttcttcttctcctgcTTCTTTAACCGCCGCCAAACGATTCTCTTCCTGGGCTTGCAGGCCCATCAAATGTTCCGTTTCCGAAGCCACAGAGCCCAAAACCGAGAAGAAGGGGCAATTGCTGAGAAGAGGGGACGTGAGAAACGTAGCCATCGTTGCTCACGTTGACCATGGAAAAACTACTCTCGTTGATGCCATGCTCAAACAAACTAAgGTATTTCGCGATAATCAATTTGTGCAGGAAAGGATAATGGACTCGAATGATTTGGAGCGCGAAAGAGGAATCACAATACTGAGTAAAAATACATCTGTCACCTATAAAGACACaaagattaatataatagatACTCCGGGTCACTCTGATTTTGGGGGTGAAGTGGAGCGCATCTTAAATATGGTGGAAGGAGTCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTAAAGAAGGCTTTAGAGTTTGGTCATtctgttgttgtggttgtgaaTAAAATAGACAGGCCTTCTGCTCGCCCAGATTATGTTGTCAACTCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCAAGCAGGGTTGTCTCCTGAAAATCTGGCGGAAGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATCCCGGGACCACGCATTGACAAAGATGGTGCACTTCAAATGCTTGTTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGGCGCGTTCAAGCTGGAGTTTTAGAAAAAGGCATGGATGTGCGAGTATGTACTTCAGAAGATACATGTAGATATGGAAGAATTAGTGAGCTTTATGTGTATGACAAATTCAACAGGGTCCCTGCAGATAATGTGGAGGCAGGTGATATATGTGCAGTATGTGGAATTACTGATATTCAGATTGGGGAGACTATTGCTGATAAAGTATCTGGGAAGCCACTACCGTCCATCAAGGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAATTTGTTACTAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAGCGGAACCTGGCAATGAGAGTTGAAGATGGTGAAACAGCAGATACATTTGTTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTAATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTGAATGAACAACTGTTGGAACCGTATGAGATTGCAACTGTGGAGGTACCAGAAGAGCACATGGGAGCTGTTGTCGAACTTCTTGGCAAGAGACGAGGACAAATGTTTGATATGGAAGGAGTTGGATCGGAAGGAACTACACTACTCAAATATAAGATCCCAACTCGTGGCCTTCTTGGATTGCGGAATTCAATTTTAACTGCCTCCCGAGGGACAGCTATTCTCAACACCATCTTTGATAGCTATGGGCCTTGGGCTGGTGACATTAGCACTCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACGAGTACTTCTTATGCACTCTCTAGTTCACAGGAGAGAGGACAGATGTTTATTGGTCCTGGAGTGGAAGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCCTTGAATGTTTGTAAGAAGAAAGCTGCAACCAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGACTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCGCAAGTATCCGAATGTGCAAGAATCCAAAATTTGcaaatacaaagaaaacaagGTAG 2034 0.4189 MAALTTNTIHASLFATILPKTSFQPFFSNQLLGLPLSSSSSPASLTAAKRFSSWACRPIKCSVSEATEPKTEKKGQLLRRGDVRNVAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDYVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLEKGMDVRVCTSEDTCRYGRISELYVYDKFNRVPADNVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKFVTSRNLRDRLYRELERNLAMRVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNEQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTSTSYALSSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKFANTKKTR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2818 677 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 81 276 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 Pfam Elongation factor Tu GTP binding domain 83 273 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 Gene3D Translation factors 277 377 - -
Ssu7g2818 677 Gene3D Elongation Factor G (Translational Gtpase), domain 3 384 667 - -
Ssu7g2818 677 CDD TypA_BipA 82 275 - -
Ssu7g2818 677 SUPERFAMILY Translation proteins 229 376 IPR009000 -
Ssu7g2818 677 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 61 672 - -
Ssu7g2818 677 TIGRFAM small_GTP: small GTP-binding protein domain 84 221 IPR005225 GO:0005525
Ssu7g2818 677 Pfam Elongation factor Tu domain 2 297 366 IPR004161 GO:0005525
Ssu7g2818 677 CDD BipA_TypA_II 283 376 - -
Ssu7g2818 677 Gene3D - 467 560 - -
Ssu7g2818 677 Pfam Elongation factor G C-terminus 473 559 IPR000640 -
Ssu7g2818 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 283 IPR027417 -
Ssu7g2818 677 Gene3D bipa protein 561 640 IPR042116 -
Ssu7g2818 677 Gene3D - 81 276 IPR027417 -
Ssu7g2818 677 CDD BipA_TypA_C 476 555 IPR035651 -
Ssu7g2818 677 CDD BipA_III 383 461 - -
Ssu7g2818 677 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 122 137 IPR031157 -
Ssu7g2818 677 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 83 675 IPR006298 GO:0005525
Ssu7g2818 677 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 PRINTS GTP-binding elongation factor signature 85 98 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 PRINTS GTP-binding elongation factor signature 129 137 IPR000795 GO:0003924|GO:0005525
Ssu7g2818 677 SUPERFAMILY EF-G C-terminal domain-like 476 591 IPR035647 -
Ssu7g2818 677 PANTHER BNAC09G43450D PROTEIN 61 672 - -
Ssu7g2818 677 SMART EFG_C_a 473 562 IPR000640 -
Ssu7g2818 677 SUPERFAMILY EF-G C-terminal domain-like 381 465 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2818 Ssu-Chr7 58833142 58841347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2818 83 210 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 6.07e-24 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2818 7 58833142 58841347 Ssu7g2818 7 58833142 58841347 ECH