Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2811 ATGCTTGAACAAGAGAATTGTCTCCTTAGATCACCATTCTTGCTATGTATCTTCATTGGCTTCTTGGTGCATTCTGTTGTGGGAGCTGTGATTCCATTGGGTTCCAAACTTTCTGTTGCTGACAACGATCATTGGGTTTCCTCCAATGGTGATTTTGCAATTGGATTCTTCAACATTTCAGATCTACCTAACCAGTTTAGCGTTGGCATTCGATTCAATTCGGAGTCTATACCGTATAGCCAACAAACTGTGGTCTGGGTTGTTGGTGCTCAGGACACAGTAGGTAACATGTCCTACTTTGAACTCACTCAGGAAGGGGAACTGGTCCTGTTTGATTCCTTAAAAGAAGTTTCTATTTGGACCAGCAAAACGGTAAACCAATCTGTAGCTTCAGCTGCCCTTCTTGACAATGGAAATCTTGTTCTTATGGACAAAGAGCAAACCATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCGGGACAAAGTTTATCTGCTAATAAAATGCTTCGGGCTGCAACTGCAAGCATGAATAGCAAGGCCAGTTACTATACTCTTCACATGAACGCTTCTGGTCATTTGGAGCTACACTGGGAAAGAGAAGTTATCTACTGGACAAGTGAAAACCCTTCTGCTTCGAATCTCAGTGCTTTCCTTACAACCAGTGGAGCTCTAGAACTTCGAGGCCGGAGTTTGAAACCTGTCTGGTCTGCATTTGGAGAGGATCACAATGATTCTGTGAAATACAGGTATCTTCGGCTCGATGTGGATGGAAATCTTCGCCTATATTCGTGGGTTGAAAGTCTAGGATCATGGAGATCAGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAATTTGTGGTGAACTTGGTGTCTGTGTCTTCAATGCCTCAGGTTCTGCTGAATGCAAGTGCCCGTTTGAGGTAACTGGGACTAACAAATGTTTGGTTCCATATGAACGGGAGTGTGAATCTGGCTCCAATATGATAGCATATAAGAACACATATCTATATGCATTCTACCCTCTTGATAATTCTGTTATTACAAGTAGTTTGCAGCATTGTGAACAGCTGTGCCTGAATGACACGCAATGTACAGCTGCAACCTTTTCCAATGATGGAATTCCACAGTGCTCAATAAAGAAAACTGGGTATGTCACTGGTTATTCAGATCCATCTGTAAGCTCAATATCATTTGTTAAGAGATGTTCAGGTCCATTTGCTGTTAATCCGAGTCTCACTGCATCTCCTCATTCCAAACCGCCTCCTAGGCTGTGTGTTCCTTGTCTAATAGGAGCTGCCACAGGCACATTTTTCATCTTTGTTATTCTCCAGTTGGGAATTGGGTTCTTCATCTACAGAAGAAAAAACTCCACCAGGAAAAAGGCCACTTTAGCTTTCACAGGCACAAACTCAAAGGGTTTAGTTGTGTTGTCCTTCTCAGAGATCAAGAGCCTCACAGGGGATTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCAAACAATCACCCGATTGCAGTTAAAGACCTGAATGCGTCTATAGAAGAAAGGAAGTTCCGAAGTGCCGTTATAAAGATGAGTAGCATCCACCATAAGAACCTTGTAAAACTGGAGGGCTATTGTTGTGAGTTTGATCATAGGTTTTTGTTGTATGAATATTGCAAGAAAGGTTCAGTGGACAAGTACATAGATGATTCTGCTCTTTGCAGGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTGTGGCAAAAGCCATATGCTACTTGCACTCTGGGTGCCGGGAGTTTATAAGCCATGGAAATTTGAAATGTGAAAATGTTATGTTGGATGAAAACTTAGCAGCCAAGGTGACTGAATTTGGGTTTGCTATAGTAGATGGCAATACAACATATTGCAGCTTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGTTAGTTTTAACCTTGTTAACTGGGTGTCGCGATCACGATCATGTTGAACTCTGTGAGTGGGCATATAAAGAATGGATGGAAGAGAGGGTGGCCAATGTGGTTGATAAAAGAATGGAAGGGGGTTACAATTCAGAGGAACTGGAGCGCGCATTGAGAATTGCGTTTTGGTGCCTTCAAATGGATGAACGCAGGAGACCTTCCATGGGGGAGGTAGTAAGAGTACTTGATGGTACATTGAGTGTTGATCCCCCACCACCTCCATTTGCCTATCAGAGACCCTTACAGGTAGATGATTCAGAAGAAAATGTCTCAGAATTAGAAGTATTCAAATTTTAG 2304 0.4249 MLEQENCLLRSPFLLCIFIGFLVHSVVGAVIPLGSKLSVADNDHWVSSNGDFAIGFFNISDLPNQFSVGIRFNSESIPYSQQTVVWVVGAQDTVGNMSYFELTQEGELVLFDSLKEVSIWTSKTVNQSVASAALLDNGNLVLMDKEQTIIWQSFDTPSDTLLPGQSLSANKMLRAATASMNSKASYYTLHMNASGHLELHWEREVIYWTSENPSASNLSAFLTTSGALELRGRSLKPVWSAFGEDHNDSVKYRYLRLDVDGNLRLYSWVESLGSWRSVWQAVENQCKVFAICGELGVCVFNASGSAECKCPFEVTGTNKCLVPYERECESGSNMIAYKNTYLYAFYPLDNSVITSSLQHCEQLCLNDTQCTAATFSNDGIPQCSIKKTGYVTGYSDPSVSSISFVKRCSGPFAVNPSLTASPHSKPPPRLCVPCLIGAATGTFFIFVILQLGIGFFIYRRKNSTRKKATLAFTGTNSKGLVVLSFSEIKSLTGDFKNQIGPKVFKGLLPNNHPIAVKDLNASIEERKFRSAVIKMSSIHHKNLVKLEGYCCEFDHRFLLYEYCKKGSVDKYIDDSALCRMLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENLAAKVTEFGFAIVDGNTTYCSFSAEKDVEDFGKLVLTLLTGCRDHDHVELCEWAYKEWMEERVANVVDKRMEGGYNSEELERALRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAYQRPLQVDDSEENVSELEVFKF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2811 767 PANTHER OS07G0415500 PROTEIN 6 762 - -
Ssu7g2811 767 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 6 762 - -
Ssu7g2811 767 ProSiteProfiles Bulb-type lectin domain profile. 158 278 IPR001480 -
Ssu7g2811 767 Pfam Protein tyrosine and serine/threonine kinase 503 636 IPR001245 GO:0004672|GO:0006468
Ssu7g2811 767 PIRSF SRK 4 764 IPR024171 GO:0004674
Ssu7g2811 767 SUPERFAMILY Protein kinase-like (PK-like) 482 731 IPR011009 -
Ssu7g2811 767 SUPERFAMILY alpha-D-mannose-specific plant lectins 182 277 IPR036426 -
Ssu7g2811 767 SMART ntp_6 329 407 IPR003609 -
Ssu7g2811 767 CDD B_lectin 46 157 IPR001480 -
Ssu7g2811 767 ProSiteProfiles Protein kinase domain profile. 467 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2811 767 Gene3D Phosphorylase Kinase; domain 1 456 562 - -
Ssu7g2811 767 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Ssu7g2811 767 Gene3D Transferase(Phosphotransferase) domain 1 564 642 - -
Ssu7g2811 767 Gene3D Transferase(Phosphotransferase) domain 1 643 738 - -
Ssu7g2811 767 Gene3D - 29 156 IPR036426 -
Ssu7g2811 767 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 210 IPR036426 -
Ssu7g2811 767 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Ssu7g2811 767 Gene3D - 157 272 IPR036426 -
Ssu7g2811 767 ProSiteProfiles EGF-like domain profile. 282 321 IPR000742 -
Ssu7g2811 767 Pfam PAN domain 340 397 IPR003609 -
Ssu7g2811 767 Pfam D-mannose binding lectin 83 175 IPR001480 -
Ssu7g2811 767 SMART blect_4 36 157 IPR001480 -
Ssu7g2811 767 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2811 Ssu-Chr7 58623467 58625770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2811 448 747 Receptor kinase-like Gene Family AT3G45860 29.942 9.07e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ssu7g2811 PK_Tyr_Ser-Thr 3.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2811 - - gmx:100815678 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2811 7 58623467 58625770 Ssu7g2811 7 58623467 58625770 ECH