Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2809 ATGCCACATATAAATatcaacattaataattatattatatgtgcACAACATGGTGAcccaaaaaattgttatatgtgcACAAATAGCGATATGCGAGCTGACTCCACCAACCCCTCTACTGCTACAAATATCATCGATATTTTGCTACGCCACACAGATAGTGCTCCATTGACTAGACTTTCATTGCATTTCTGTCCCTGCTCCTTCCCTAAAATCATGGCCGAATCACTCCTTTTCAGCTTCGCAGAATCACTGACAGGGAAACTCGCGTCTCATGCCGTTGAACAAGCGTCTCTGGCGCTGGGTGTTCACCACGATCTACAACAGATGAAAAAGACTATGGCACTTATCAAAGCTTTCCTGTTAGACGCTGAGCAGAAGAAGCCACAGAATAATGCATTGAGTGAATGGCTAAGACAGATCAAGAGCGTCTTCTCCGATGCCGAAGACATAGTTGACGATTTTGAGTGCGAAGCATTGCGGAAGCGCGTTGTCAACACTCACGGTAGCGTCTCAAGGAAGGTACATCGTTTCTTCTCAACTAGTAATCCTCTCGTTTACCGTCTTAGAATGGCGCGTGAGATAAAAGACATCAAGGAGAGGTTGGACAAGGTTGCAGCTGATAGGCACATGTTTGGCCTTCAAATCATTGACAAAGATACACGTGTCGTGCATGTGAGGGAAATGACTCATTCCCATGTAAACCCTTCAAATGTGATAGGGAGGGAAcacgaaaaacaaaaaataatagagctTTTGCTGCAAGATGTTCATCATCAAAGTCTCTCTGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAAGGACATGAGCATTGACGAATGTTTCTCGTTAAAGATGTGGGTGTGTGTCTCTAATGATTTTGAGCTTAGGAATGtgcttattaaaatattcaattctgCTCCTAACCCAACTAATGAAAACTTCAAAAACTTTGAGACGGAGCAACTTCAAAATCGTTTGAGAAATACACTTCAACGTCAAAAGTTCTTGCTCGTGTTGGACGACGTGTGGAACGAGGATCATGCCAGATGGGATGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTAAAGTCCTAGTGACAACTCGTAGCCACTCAATAGCTACCATGATGCGCACTAAATCCTCTGACTCTTACCTTCTTGAAGGCCTTTCTGAAGCAAATTCCTTCTCTCTATTTGTCAAATCGGCTTTTGAAGAAGGAGAACAGAAAAAACATCCACAATTGTTGGAGATTGGAAgagaaattgttaaaaaatgtagAGGCATACCGCTGGCAGTAAAAACATTAGGGAGTTCACTATTCTCAAGGGTTGATAGGAAAGAGTGGGAGTCTGTTAGAGATAATGAGATTTGGAATCTaccacaaaatgaaaatgacatTTTGCCTGCTCTCCAATTAAGTTATGATCAGCTGCCTTCATATTTAAAACCATGCTTTGCTTGCTTCTCTCTTTCCGCTGAGGACCATCTTATTTCTAGTAGTCTTATTACTATCCTGTGGGAGGCACTTGGTTTTCTTCCACTTCCTAAGGAAAGTGAAACAATATATGATGTTGGTAATCAGTTCTTGCGTGAGCTACTGTCAAGATCTTTTCTTACAGATTTTATTGACTTGGGCAGTTATTACAGTTTTAAATTACATGATTTAGTGCGTAATCTTGCGGTGTATGTTGCAAAAGGtgaatttcaaataatagaTCCCCGCAGTCCCAAAATATCTGAGCATGCCCAACATTTGGCATTCGACGAAAATAATTTGCTTGGCCAAGCTCTACTTCCCCCAGGTTTGAGAACTATAATTTTTCCTCCGGATGCTGCCAATGAAGCTTTCATGAATACGTTGGTGTCAAGATGCAAATACTTGAGGGTTTTAGACTTAAGTTACTCTAAATATGACAGTTTGCCTCGCTGCATTGGAAAGTTGAAACATTTAAGATATCTAAATCTTGAGTGTAGTGCAAAACTTAAGGGACTCCCTGATTCAGTGTGCAAACTCCAAAATTTGCAAACTTTGGCCCTCGGTGGATGCACAGAGATAGAAGAATTGCCCAAAGGAATAAGAAAACTAATCAGCCTTCGTCAGCTGTATATAACCACAAAGCAACCTGAGTTTCCAGAAAAAGAGATTGCAAATTTGACTTCTTTAGAAGATTTAAGATTCcattattgtgataaattgaAGTCATTGTTCAAAGGGATAAAACTTCCTAGTCTTAAAACTTTGGTTTTGAATGACTGTGCGAGCCTAAAGTCTTTGTCGTTTCATGCCATTGGAAATTTACAAACATTGAAAATCTTTAAATGTAATAAGTTGGAATTGTCAATGGGGGTTGGCAACCAAATCCCTGATTTACGGTTAAAGTTACTTGACCTTGAACATTTGCCACATCTGGTCACTTTGCCTCAGTGGTTGCAAGGATCTATGAACACATTACATTCCTTGATAATTTATTGTTGCGAAAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTCTGATTTTTCTCAAACAACTTGAAATTGAAGATTGTCCAAAGCTGCTCTCACTCCCTGAGAACATGCATCGCCTCACAAGCAttgatcatttatatattaagggTTGTCCTGAATTGTGTAAAAGATGCCAGCCAGGAGTTGGACAAGATTGGCCTAAGATATCGCATATCAAAAAAGTTATCATTGATGAACTTGAAGAGTAA 2757 0.3819 MPHINININNYIICAQHGDPKNCYMCTNSDMRADSTNPSTATNIIDILLRHTDSAPLTRLSLHFCPCSFPKIMAESLLFSFAESLTGKLASHAVEQASLALGVHHDLQQMKKTMALIKAFLLDAEQKKPQNNALSEWLRQIKSVFSDAEDIVDDFECEALRKRVVNTHGSVSRKVHRFFSTSNPLVYRLRMAREIKDIKERLDKVAADRHMFGLQIIDKDTRVVHVREMTHSHVNPSNVIGREHEKQKIIELLLQDVHHQSLSVIPIVGMGGLGKTTLAKLVFKDMSIDECFSLKMWVCVSNDFELRNVLIKIFNSAPNPTNENFKNFETEQLQNRLRNTLQRQKFLLVLDDVWNEDHARWDELKEIIDVGVEGSKVLVTTRSHSIATMMRTKSSDSYLLEGLSEANSFSLFVKSAFEEGEQKKHPQLLEIGREIVKKCRGIPLAVKTLGSSLFSRVDRKEWESVRDNEIWNLPQNENDILPALQLSYDQLPSYLKPCFACFSLSAEDHLISSSLITILWEALGFLPLPKESETIYDVGNQFLRELLSRSFLTDFIDLGSYYSFKLHDLVRNLAVYVAKGEFQIIDPRSPKISEHAQHLAFDENNLLGQALLPPGLRTIIFPPDAANEAFMNTLVSRCKYLRVLDLSYSKYDSLPRCIGKLKHLRYLNLECSAKLKGLPDSVCKLQNLQTLALGGCTEIEELPKGIRKLISLRQLYITTKQPEFPEKEIANLTSLEDLRFHYCDKLKSLFKGIKLPSLKTLVLNDCASLKSLSFHAIGNLQTLKIFKCNKLELSMGVGNQIPDLRLKLLDLEHLPHLVTLPQWLQGSMNTLHSLIIYCCENLEELPEWLSTLIFLKQLEIEDCPKLLSLPENMHRLTSIDHLYIKGCPELCKRCQPGVGQDWPKISHIKKVIIDELEE 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2809 918 Pfam Rx N-terminal domain 83 170 IPR041118 -
Ssu7g2809 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 501 IPR027417 -
Ssu7g2809 918 PANTHER OS08G0543100 PROTEIN 99 895 - -
Ssu7g2809 918 Pfam NB-ARC domain 243 489 IPR002182 GO:0043531
Ssu7g2809 918 Gene3D - 82 196 - -
Ssu7g2809 918 SUPERFAMILY L domain-like 565 906 - -
Ssu7g2809 918 Gene3D Ribonuclease Inhibitor 589 754 IPR032675 -
Ssu7g2809 918 Gene3D Ribonuclease Inhibitor 755 899 IPR032675 -
Ssu7g2809 918 Gene3D - 402 492 IPR042197 -
Ssu7g2809 918 PANTHER DISEASE RESISTANCE PROTEIN RP 99 895 IPR044974 GO:0006952
Ssu7g2809 918 CDD RX-CC_like 80 206 IPR038005 -
Ssu7g2809 918 Gene3D - 221 396 IPR027417 -
Ssu7g2809 918 PRINTS Disease resistance protein signature 439 453 - -
Ssu7g2809 918 PRINTS Disease resistance protein signature 340 354 - -
Ssu7g2809 918 PRINTS Disease resistance protein signature 264 279 - -
Ssu7g2809 918 PRINTS Disease resistance protein signature 753 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2809 Ssu-Chr7 58543143 58545899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2809 257 890 WRKY Transcription Factor Family AT5G45050 23.810 5.88e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2809 - - gmx:100780033 1271.91