Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2791 atggggaagaagaagagtaGGGTTTCCGAAGACGAGGAAATCGAATCTGACACCAACCCTATCCGTCTAAACGAAAACACCCTCTACCAGGTTCTTGGTGTGGAGAAAACGGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAAAACGTTATCTCAATTCTTGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTTCGAGAATATTTCAGAGCAATGTACAAGAAGGTCACCGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGATTCTGAGAAAAGTGATTTGATTGATCTCTACAAGAAGTGCAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTACTCTTGACTCACATCGATTCAAGGATATTCTTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAAACTAAAGCCTACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCCTTAGGAAGGAGGGCAAAATCATCAAATAAGCAATCAGAAACAGATCTGTATGCAATCATATCACAACGTCGATATGAGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCTAGAACCCTCTGAAGAGGAATTTGAAGTTGCACAGAGAAAGTTGGAAAGCCGAAGGCCCTCAAAAAAGTCAAAGCGCAAATAA 840 0.406 MGKKKSRVSEDEEIESDTNPIRLNENTLYQVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRAVYDQTGCVDDAELAGDVVQNLREYFRAMYKKVTEADIEEFEANYRGSDSEKSDLIDLYKKCKGNMNRLFCSMLCSDPTLDSHRFKDILDEAIAAGELKETKAYKKWAKKISETKPPTSPLGRRAKSSNKQSETDLYAIISQRRYERKDRFDSMFSSLISKYGGGQMLEPSEEEFEVAQRKLESRRPSKKSKRK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2791 279 MobiDBLite consensus disorder prediction 1 20 - -
Ssu7g2791 279 SUPERFAMILY Chaperone J-domain 23 98 IPR036869 -
Ssu7g2791 279 Pfam DnaJ domain 28 89 IPR001623 -
Ssu7g2791 279 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Ssu7g2791 279 MobiDBLite consensus disorder prediction 199 218 - -
Ssu7g2791 279 SMART dnaj_3 26 84 IPR001623 -
Ssu7g2791 279 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 2 279 IPR042977 -
Ssu7g2791 279 MobiDBLite consensus disorder prediction 1 19 - -
Ssu7g2791 279 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 2 279 - -
Ssu7g2791 279 PRINTS DnaJ domain signature 29 47 IPR001623 -
Ssu7g2791 279 PRINTS DnaJ domain signature 47 62 IPR001623 -
Ssu7g2791 279 PRINTS DnaJ domain signature 64 84 IPR001623 -
Ssu7g2791 279 PRINTS DnaJ domain signature 84 103 IPR001623 -
Ssu7g2791 279 MobiDBLite consensus disorder prediction 248 279 - -
Ssu7g2791 279 CDD DnaJ 27 81 IPR001623 -
Ssu7g2791 279 Gene3D DnaJ domain 14 125 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2791 Ssu-Chr7 58014569 58017404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2791 29 89 C2H2 Transcription Factor Family AT1G74250 42.424 4.97e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2791 K09529 - gmx:100781463 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2791 7 58014569 58017404 Ssu7g2791 7 58014569 58017404 ECH
Ssu4g1456 4 24238473 24241068 Ssu7g2791 7 58014569 58017404 PCT