Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2781 ATGAACCCACTGGCAAGGAGTCTAGAGGAATTGCTGCCGGATAGAGTTTCAGCTACATATTGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGTTGCCTTTCTGGTTCCCTTTTTTGggCTTCTGATGGCTTTAATTGGTTCTCTCTTTAGTATACTCGTGGCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTATTGGGAAAAAAGCTACAAAGACACAGGTTGCACTCAGTGTCACAATTGCTGCATTGGGAATCATTTGTGGACTCCTTGGAACATATTCCTCTCTGTTGAGTATTGCAGATAGTTACTGA 333 0.3994 MNPLARSLEELLPDRVSATYWCFILLRTALVASTVCVAFLVPFFGLLMALIGSLFSILVAVIMPSLCFLKIIGKKATKTQVALSVTIAALGIICGLLGTYSSLLSIADSY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2781 110 Coils Coil 110 110 - -
Ssu7g2781 110 Pfam Transmembrane amino acid transporter protein 17 100 IPR013057 -
Ssu7g2781 110 PANTHER BNAA03G19350D PROTEIN 1 107 - -
Ssu7g2781 110 PANTHER OS05G0424000 PROTEIN-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2781 Ssu-Chr7 57780320 57784025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2781 1 109 Amino Acid or Auxin Permease AAAP Family AT5G02180 43.119 2.83e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2781 K15015 - gmx:100816431 197.593