Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2780 ATGGTTAGGGgcgataataataacaacagcaGCTACAAGGAGAAGGAGAGAGACATTGAGTTTTTGTTTGATCAGAACGACGAGGATGTCGACCAAGAGGATCTTGACGCTGTGAAGTACGAGAGTGAGTGTAGCAGTGAAGGTCACAGTGACGATGAAGATGGGAATCAGAGAGCACAGCGCAACTCTTTCTCTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATAGCTGCTGCTCCAAATTTTGAGTCAGTTCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGGCACTCGCTCAAAGAGTAGCTTAGACATTGATGGAAAGACACCTTTTCTATCTGCTCCTGAAGGTAGTCGTCAATCAACTTGGTGGGAGAAAGCCTCAGTACAACGGCATTTTACCGGAGAATTGCCCATTGGATATGGATGCAGCTTCACTCAAACAATTTTCAATGGCATTAATGTGATGGCTGGAGTTGGCCTTCTATCTTCACCATATACAGTGAATCAAGCTGGGTGGATGAGCTTGGTAGTGATGCTTCTTTTTGCAGTTATTTGTTGTTATACAGCCACCCTTCTGAGATATTGCTTTGAAAGCAAAGAAGGAATCATTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCAATCATTTTGTACACTGAATTATATTCCTATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCGCTAGAGTGTTTCCTGGTACATCCTTAGATTTGGGTAGTTTCCAGTTAGACTCTCTGCATTTGTTTGGAGTTTTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCATAATCTCTTATCTATCAGCTGGAGGGGTTGTTGCAACACTTTTGATTATTATCTGTGTGATATCTGTTGGGACAATAGACGGTGTTGGATTCCATCAAACTGGTCAATTGGTAAAATGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCACTAATAACATGTTTTGTTTTGTGTGTTTTGATATATGGAGGCGTTGCAGTCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACACTGAACATGCCACCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTTATTAACCCACTCACTAAATATCCTTTTTGCCAAAACTACTTAGTTtatgaaagtttaaaaattgtcaTGGTTTGA 1329 0.3973 MVRGDNNNNSSYKEKERDIEFLFDQNDEDVDQEDLDAVKYESECSSEGHSDDEDGNQRAQRNSFSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFGTRSKSSLDIDGKTPFLSAPEGSRQSTWWEKASVQRHFTGELPIGYGCSFTQTIFNGINVMAGVGLLSSPYTVNQAGWMSLVVMLLFAVICCYTATLLRYCFESKEGIITYPDIGEAAFGRYGRIVVSIILYTELYSYCVEFITLEGDNLARVFPGTSLDLGSFQLDSLHLFGVLTALIILPTVWLKDLRIISYLSAGGVVATLLIIICVISVGTIDGVGFHQTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFVLCVLIYGGVAVMGFLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYPFCQNYLVYESLKIVMV 442
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2780 442 MobiDBLite consensus disorder prediction 1 72 - -
Ssu7g2780 442 MobiDBLite consensus disorder prediction 37 58 - -
Ssu7g2780 442 PANTHER AMINO ACID TRANSPORTER AVT1A 43 433 - -
Ssu7g2780 442 PANTHER OS05G0424000 PROTEIN-RELATED 43 433 - -
Ssu7g2780 442 Pfam Transmembrane amino acid transporter protein 151 427 IPR013057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu7g2780 Ssu-Chr7 57776581 57780258 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2780 5 432 Amino Acid or Auxin Permease AAAP Family AT2G41190 60.802 0.0 523
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2780 K15015 - gmx:100790344 736.102