Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2773 ATGGGCCAAACAATCAGAGGAGGTTTCCTTGGATCATGCTGCTCCAAGCAAAGGGTCAACACTCGATTCTTTAGTTCTGTAGTACCACGGAAGAGGTATCATGAAATTTCATTGGCATGCCAAAGTATGAATATGAGGCTTTTGGTACCTAAACAAAAAATGCTTCACAAAGTTAAGTGTAATTTGGGACCAGTAAGTTGGCCACGGGGATGTGCATCAGTAGGCTTGATTTTTGGATTACTTGTATGTAATTCAAGTTCTGAACCTGCTCATGCTGAGGCACActctgaaaatgaaaataggaaagaTGACTGCAACGAGTACGAGTCAAATGTTAAACTCTCACATGGGAAGAAAGTTTACACTGACTATTCTGTAATTGGAATACCAGGGGATGGAAGATGCATGTTCCGCTCTGTTGCTCATGGGGCTTGTTTGAGGTCTGGAAAGTCCCCTCCTAGTGAAAGCATTCAGAGAGAGCTGGCAGATGATTTAAGAGCCAGAGTTGCTGATGAGTTTATCAAAAGAAGGGAACAGACTGAATGGTTTGTTGAAGGTGattttgatacatatatttcaCAAATAAGGAAGCCTCATGTGTGGGGCGGTGAACCCGAATTGTTCATTGCTTCACATGTTTTGCAGATGCCTATCACTGTATACATGTATGATAAGGATGCTGGTGGCTTGATATCAATTGCTGAGTATGGCCAAGAATACGGAGAGGAAAACCCAATTAGAGTTCTCTACCATGGGTTTGGTCATTATGATGCATTAGAGATTCCGAGAAGGAAGGGTGCTAGGCCAAGACTGtag 816 0.4093 MGQTIRGGFLGSCCSKQRVNTRFFSSVVPRKRYHEISLACQSMNMRLLVPKQKMLHKVKCNLGPVSWPRGCASVGLIFGLLVCNSSSEPAHAEAHSENENRKDDCNEYESNVKLSHGKKVYTDYSVIGIPGDGRCMFRSVAHGACLRSGKSPPSESIQRELADDLRARVADEFIKRREQTEWFVEGDFDTYISQIRKPHVWGGEPELFIASHVLQMPITVYMYDKDAGGLISIAEYGQEYGEENPIRVLYHGFGHYDALEIPRRKGARPRL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2773 271 ProSitePatterns EF-hand calcium-binding domain. 224 236 IPR018247 -
Ssu7g2773 271 SUPERFAMILY Cysteine proteinases 123 259 IPR038765 -
Ssu7g2773 271 PANTHER OTU DOMAIN CONTAINING PROTEIN 28 271 - -
Ssu7g2773 271 Pfam OTU-like cysteine protease 130 256 IPR003323 -
Ssu7g2773 271 Gene3D - 104 267 - -
Ssu7g2773 271 PANTHER OS09G0487700 PROTEIN 28 271 - -
Ssu7g2773 271 ProSiteProfiles OTU domain profile. 124 262 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2773 Ssu-Chr7 57528181 57530428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2773 - - ccaj:109795157 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2773 7 57528181 57530428 Ssu7g2773 7 57528181 57530428 ECH
Ssu7g2773 7 57528181 57530428 Ssu4g0713 4 11115150 11116646 PCT