Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2772 ATGCCACGTCACCATCTCCATCTCCGCCTTTCTTTGTTCCTCATCGTTTCCGTTCCCCTCACCGTGTCCCTCAACTCCGACGGCCTCTCTCTGCTGGCCCTCAAGGCCGCGATATCCCTGGACCCGACAGGGGCCCTAACTTCCTGGGCCGACTCCGCCCCGACCCCGTGCAACTGGGCCGGCGTGACCTGCAAGCACGACCGCGTGACCCAGCTGAGCCTCCCCTCGAAGGCCCTGTCCGGCTACCTCCCCTCCGAACTGGGCCTCCTGGCCCACCTCAGGCGCCTCGCCCTCCCCCACAACAACCTCTCCCGCACCATCCCCTCCACCCTCTTAAACGCCGCCAACCTCCTCGTCCTGGACCTATCCCACAACGCCCTCACGGGCCCACTCCCCGACTCGCTCTCCTCCCTCAAACGCCTCGTGCACCTCGACCTCTCCTCGAACTATCTCTCCGGTCCCCTTCCGGTCACCCTCGCCAACCTCCCCTCCCTCGCGGGCACGCTCAACCTCTCCCACAACATGTTCACCGGCAAAATTCCGCTCTCCCTCGGGTCGCTCCCGGTCACCGTCAGCCTCGATCTCTGTTTCAACAACCTCACAGGGGAAATCCCTCAGGTCGGATCCTTGCTCAACCAGGGCCCCACCGCTTTTTCCAACAACCCCAACCTCTGCGGGTTCCCCTTGCGAGACGCGTGCCCCGAACCTCTTAGAATCCCGACCGAGAACCAGGACCCGAACCTGAGGCTCCGACCCGAGCGGAACGCGCGAGGGGGCGGGCTTTTTGCTTGTGTCGTTGCGACGGTGGCGGTCTCCGGCGTGCTGCTGTGTTCCGCCGCGGTTTTTCTGGTCCTCCGGCGAGGGAGGGGCCGGGAGGGGCAATTTGGGAAAGTGGGGAGTGAGGGCGTGGGCGTGGAGGAGAAGGGGAGGTTTGCGGTGTGTGACGAGGGAGGGGTGTTGGGCGGGATGGAGTTGGAGGACTTGTTGAGGGGTTCGGCGTACGTGGTGGGGAAGAGTAGGACTGGGATTGTGTACAAGGTTGTCGGTGTCGGAAAGGGGGCGGGTGCGGCGGCGGCGACGGTGGTGGCGGTTCGGAGGCTCGGTGAGGGGGCTGCCACGTGGCGGTTGAAGGAGTTTGAGGCGGAGGTGGAGGGCGTGGCGAGGGTGAGGCACCCCAATGTTGTGGCTCTGAGAGCGTATTACTTTGCCAGGGAGGAGAAGCTGCTCGTCACGGATTTCGTCCGCAACGGAAACTTGCACACCGCGTTGCATGGTGGGCCTTCCAATTCATTTTCACCACTATCATGGGCAGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGCTTAACCTACATACACGAGTTCAGTGGTAGAAAATATGTCCATGGAAACCTTAAATCAACAAAAATCCTTCTGGATGAGGATCTTCATCCTTATATATCCGGTTTTGGACTTACCCGTTTGGGTATAGGTACCTCAAAGTCCACCACATTAACACCAAAACGGCTCAGTTCAAACCACTCTATGGCAACATCAGCAATCGGTTCAAAAGTTTCAGCTTCCTCCAACATCTACTTGGCACCTGAGGTGCGCATAGCTGGTGGAAAGTTCACTCAGaaatgtgatgtgtattctctTGGTATAGTGCTATTAGAACTTTTGACAGGTAGGCTTCCAGATTTAGGAGCTGAAAATGCTGGCATGGATCTAGAGAGTTTTGTGAGGAAAGCATTCAGGGAGGAGCAGCCCTTGTCAGAGATTATAGACCCTGCACTTCTGCCTGAGGTTTATGCTAAAAAGCAAGTTATTGCAACATTTCATGTTGCACTCAACTGCACAGAACTTGATCCAGAATTGCGACCAAGAATGAGAACTGTGTGTGAGACCCTTGATCGAATCAAAACAGAGTGA 1914 0.5711 MPRHHLHLRLSLFLIVSVPLTVSLNSDGLSLLALKAAISLDPTGALTSWADSAPTPCNWAGVTCKHDRVTQLSLPSKALSGYLPSELGLLAHLRRLALPHNNLSRTIPSTLLNAANLLVLDLSHNALTGPLPDSLSSLKRLVHLDLSSNYLSGPLPVTLANLPSLAGTLNLSHNMFTGKIPLSLGSLPVTVSLDLCFNNLTGEIPQVGSLLNQGPTAFSNNPNLCGFPLRDACPEPLRIPTENQDPNLRLRPERNARGGGLFACVVATVAVSGVLLCSAAVFLVLRRGRGREGQFGKVGSEGVGVEEKGRFAVCDEGGVLGGMELEDLLRGSAYVVGKSRTGIVYKVVGVGKGAGAAAATVVAVRRLGEGAATWRLKEFEAEVEGVARVRHPNVVALRAYYFAREEKLLVTDFVRNGNLHTALHGGPSNSFSPLSWAARLKIAQGAARGLTYIHEFSGRKYVHGNLKSTKILLDEDLHPYISGFGLTRLGIGTSKSTTLTPKRLSSNHSMATSAIGSKVSASSNIYLAPEVRIAGGKFTQKCDVYSLGIVLLELLTGRLPDLGAENAGMDLESFVRKAFREEQPLSEIIDPALLPEVYAKKQVIATFHVALNCTELDPELRPRMRTVCETLDRIKTE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2772 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 636 - -
Ssu7g2772 637 Gene3D Ribonuclease Inhibitor 167 235 IPR032675 -
Ssu7g2772 637 Gene3D Phosphorylase Kinase; domain 1 331 413 - -
Ssu7g2772 637 Pfam Protein tyrosine and serine/threonine kinase 336 631 IPR001245 GO:0004672|GO:0006468
Ssu7g2772 637 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Ssu7g2772 637 ProSiteProfiles Protein kinase domain profile. 330 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2772 637 Gene3D Transferase(Phosphotransferase) domain 1 414 637 - -
Ssu7g2772 637 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Ssu7g2772 637 Gene3D Ribonuclease Inhibitor 23 166 IPR032675 -
Ssu7g2772 637 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 636 - -
Ssu7g2772 637 SUPERFAMILY L domain-like 27 230 - -
Ssu7g2772 637 SUPERFAMILY Protein kinase-like (PK-like) 335 631 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2772 Ssu-Chr7 57482880 57487808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2772 24 637 Receptor kinase-like Gene Family AT3G57830 53.882 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu7g2772 PK_Tyr_Ser-Thr 5.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2772 - - gmx:100806058 957.977