Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2769 ATGGCCGATTTTGGTGAGTATTTTGTGTTGCTTCTCATTTGGCTAGCCTCAATCTTCTTGTTACGTGTAATCCTCACAAAGCCTCGCATCAAAGCACGCCTACCACCAAGTCCTAGAGCCCTCCCTGTGTTAGGACACCTCCACCTCCTCAGCAAGCTCCCTCACCAAGCATTTCACAACATCTCATCCCGTTATGGCCCTTTGGTTTACCTCTTGTTCGGTGCCAAACCATGTGTTCTTGTTTCATCACCTGAAATGGCAAGACAATGCCTCAAAACCCACGAAACATGTTTCCTTAACCGACCCAAAAGATCCAACGTGGACTACATCACGTACGGTTCTTCAGATTTTGTGTTGGCACCCTATGGACCTTATTGGAGGTTCATGAAAAAGCTTTGCATGACTGAACTCCTTGGAGGCCGAATGCTTCACCAACACCTTCCAATTAGAGTAGAGGAGACGAAGCTTTTCTTGATGAATATAATGCAAAAGGCTAATTTGAGAGAGGAGGTGAACATAGGCAAGGAGCTAGCCATGCTCGCAAATAACATAATCACAAGGATGGCCTTGAGAAGAAGGTGTTGTGATGTTGAAGGGGAGGGGCACCAATTGATTGAGTTGGTGAAAGAGATGACTGAGCTAGGTGGGAAGTTCAACTTGGGAGACATGTTGTGGTTTGTTAAGAAGTTGGATTTGCAAGGGTTTGGTAAAAGGCTTGTGAGTGTTAGAAGTAGGTATGATGCCATAATGGAGAGGATCATGAAAGAACATGAAGATGCaagaatgaagaagaaggaaatGGGTGGTGATGGAGATGAAGCAGTGAGGGATTTACTTGATGTTCTACTTGATATCTATAATGATGAAAGTTCAGAGATTAGATTAACCAGAGAAAATATCAAGGCCTTCATTATGAACATGTTTGGTGCTGGAACTGAGACATCAGCCACTACAATAGAATGGGCTTTGGCTGAGCTAATCAACCATCCAGGTGTTATGGTAAAAGCTAGGCAAGAGATTGATTCAGTGGTTGGTAAGAATAGATTGGTGGAGGAATCAGATATTCCCAACCTTCCCTATGTTCAGTCCATAATGAAGGAAACAATGAGGCTTCACCCCACTGGGCCTTTAATAGTGAGGCAATCCACTGAAGATTGTAATATTAATGGGTATGACATTCCAGCAAGGACCACTGTGTTTGTAAATGTATGGGCCATTGGTAGGGACCCAAACTATTGGGAGAACCCACTTGAGTTCCAGCCAGAGAGGTTCCTTAATGAAGAGGGACAGAGCCCACTGGACCTGAAGGGTCAGCATTTTGAACTTTTGTCATTTGGGGTTGGAAGAAGAAGCTGTCCTGGTGCTTCACTAGCTTTGCAGATTATTCCCACAACCCTGGCTGGAATGATTCAGTGTTTTGAATGGAAGGTTGGTGAAGAAGAGGATGGAATGGTTGACATGGAAGAGGGGCCTGGAATGGCCCTTCCTAGGGCACATCCTTTGCTATGTGTCCCTTTGGCTAGGCTCCATCCTTTCGCCAAAGtctaa 1548 0.4425 MADFGEYFVLLLIWLASIFLLRVILTKPRIKARLPPSPRALPVLGHLHLLSKLPHQAFHNISSRYGPLVYLLFGAKPCVLVSSPEMARQCLKTHETCFLNRPKRSNVDYITYGSSDFVLAPYGPYWRFMKKLCMTELLGGRMLHQHLPIRVEETKLFLMNIMQKANLREEVNIGKELAMLANNIITRMALRRRCCDVEGEGHQLIELVKEMTELGGKFNLGDMLWFVKKLDLQGFGKRLVSVRSRYDAIMERIMKEHEDARMKKKEMGGDGDEAVRDLLDVLLDIYNDESSEIRLTRENIKAFIMNMFGAGTETSATTIEWALAELINHPGVMVKARQEIDSVVGKNRLVEESDIPNLPYVQSIMKETMRLHPTGPLIVRQSTEDCNINGYDIPARTTVFVNVWAIGRDPNYWENPLEFQPERFLNEEGQSPLDLKGQHFELLSFGVGRRSCPGASLALQIIPTTLAGMIQCFEWKVGEEEDGMVDMEEGPGMALPRAHPLLCVPLARLHPFAKV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2769 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 512 - -
Ssu7g2769 515 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 Pfam Cytochrome P450 35 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 512 - -
Ssu7g2769 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2769 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2769 Ssu-Chr7 57393594 57395461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2769 1 508 Cytochrome P450 AT5G06900 52.745 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2769 K24188 - gmx:100807524 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2769 7 57393594 57395461 Ssu7g2769 7 57393594 57395461 ECH
Ssu4g1439 4 23932260 23934225 Ssu7g2769 7 57393594 57395461 PCT