Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2768 ATGGACGATATTCAAGGCTACATACCAACATTCTTTGTTTGGCTAGCCTCAATAATATTGCTCCGAGCCATATTCAAAGCCTCAAAATTTCGTTTTCCACCTAGTCCATTGGCCTTACCAGTTATTGGACACTTCCACTTACTAAAATCACCCCTTCACAGAGCTTTTCAGAAGCTTTCAAATCGTTATGGACCCTTGATTCACCTCTCCCTTGGCTCCACTCCCACTGTTGTTGTTTCCTCCGCAGAAATAGCCAAAGAAATCTTCAAAACCCATGAACTTTCTTTCTCCAACCGACCCGCAAATGTTGCCATTAGCTATCTCACTTATAACTCATCTGACTTAGGGTTTGCCCCTTATGGAACCTACTGGAAGTTCATGAAGAAGCTTTGCATGTCAGAACTTCTTAATGGGAGGATGCTGGATCAACTAAGACCCATCAGGCAAGAGGAGATAAATAGGTTTGTGCTAATGATGCAGAAGAAAGGTGAAGCATGTGAGGGTGTGAATGTGGGAGATGAGCTTTTGAAACTGACAAACAGCATAGTGACGAGAATGGCAATAGGCAAAAGCTGTTTTAACTCTGATGATGAGGCTCACAAGGTGACAGAAAGGGTCAAGGAGTCTTCCAAGTTGAGTGGAATGTTTAACCTGGCtgattatttttggttttgtagAAGGTTGGATCTGCAGGGAATTGGGAAGAAGCTGAAGGAGGTTCGTGAGAGGTTTGACACCATGATGGAGAGTATCATTCGGGAGCACGAAGATGCTAGAAATAAATCGACCACAAAGGATGCTCCAAAAGATGTTCTCGATGCTCTTTTGAGTATTTCTGAAGATCAAAGCTCAGAGGTGAAAATAACCAGAGACAACATTAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACAGCAGTTACTCTAGAATGGTCACTGGCAGAACTAATTAATCATCCAACAGTCATGGAGAAAGCAAGGAAGGAGATTGACTCTATCATTGGCAAGGACAGAATAGTAATGGAATTAGATATAGATAATCTCCCTTATCTCCAAGCCATAGTGAAGGAGACACTGAGGCTTCACCCTCCATCTCCATTTGTATTGAGAGAGTCAACTAAGAATTGCACCATTGCTGGATATGACATTCCAGCAAAGACTCAGGTTTTCACTAATGTGTGGGCTATTTGTAGGGATCCAAAGCACTGGGATAACCCCCTTGAGTTTAGGCCAGAAAGGTTTCTTAGCAAAGATGAGAGTGGAAAAATGGGTCAAGTTGATGTCAGGGACAACATTATCAACTTTTGCCTTTTGGGAGCGGAAGAAGAGGGTGTCCTGGAACTTCACTAG 1359 0.4238 MDDIQGYIPTFFVWLASIILLRAIFKASKFRFPPSPLALPVIGHFHLLKSPLHRAFQKLSNRYGPLIHLSLGSTPTVVVSSAEIAKEIFKTHELSFSNRPANVAISYLTYNSSDLGFAPYGTYWKFMKKLCMSELLNGRMLDQLRPIRQEEINRFVLMMQKKGEACEGVNVGDELLKLTNSIVTRMAIGKSCFNSDDEAHKVTERVKESSKLSGMFNLADYFWFCRRLDLQGIGKKLKEVRERFDTMMESIIREHEDARNKSTTKDAPKDVLDALLSISEDQSSEVKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKARKEIDSIIGKDRIVMELDIDNLPYLQAIVKETLRLHPPSPFVLRESTKNCTIAGYDIPAKTQVFTNVWAICRDPKHWDNPLEFRPERFLSKDESGKMGQVDVRDNIINFCLLGAEEEGVLELH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2768 452 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 Pfam Cytochrome P450 33 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 Gene3D Cytochrome P450 25 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 SUPERFAMILY Cytochrome P450 33 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g2768 452 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 441 - -
Ssu7g2768 452 PANTHER CYTOCHROME P450 93A2 5 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2768 Ssu-Chr7 57349288 57352465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2768 1 417 Cytochrome P450 AT5G06900 49.169 3.40e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2768 K24188 - gmx:100811919 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2768 7 57349288 57352465 Ssu4g1440 4 23935600 23937462 PCT