Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2763 ATGGGGTTTTCCATAGGTATTGAATTAGAAGCAGAACAACAAGAGCAAGAGGCGAAGTTTTTAGGTTCCTCTCTGATCATGGCTTCAAGTGTTAAGAGCACCAACTCAACAACTCAACTTGAACCACTCGCCCCACCCccacatcttcatcatcaacaaccacaacatcattttcatcatcatcaaataCCAGACCAACAAATTTCTTTTGGGATGATGCCATCTTCCTCATCAGCCTCTATCCCCGGAAATTACTTAAGCAAAGATTCTGGAGCATATGATTTGGGGGAATTGGATCAAGccttttttttgtatcttgATGGACAAGCTGACCCTTCCAGTGCTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCCAATTCCAAgGTTAACATGGAAATTCCCTCCACACAAACCAGTGGCACCAAGAGACCACCAGAGCCATCCATGGCCAAGCCCAACCCACACACTGAAGCCCCCTCTGCACCTGAACCACCCACAGCTGTAAAGCGAGAGGGCAATCGCAAGGGAACAACGTCAAGTTCTGAGCAGGAGGCACCCAAAACTCCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGGGAAGCAGCAAAGAAAAGCAGGCTCAGGAAAAAGgCGTACGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAACCAGCTAGAACAAGAATTACAGCGTGCTAGAGCTCAAGGCATGTTAATCGGTGGAAGTGCACTTCTTGGAGGGGAGCAAGGCATTCCTATGTCTATGAGTGGCATTAGCTCAGaggCTGCAATGTTTGACATGGAATATGCGAGATGGTTGGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGCAGCCCAAGAACATCTTCATGAAAACGAGCTTCGGTTATATGTGGACAATTGCTTGGCTCACTATGATCAAGTACTGAACCTGAAGAGTATAGTGGCCAAAACAGACGTATTCCATGTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGTTTCATGTGGATTGGTGGGTTCAGGCCATCTGAACTCATCAAGGTTATTCTGAGTCAAATTGAGCCTCTTACGGAGCAACAAATACTAGGGATATGTGGATTGCAACAATCCACACAAGAGGCAGAAGAGGCTCTCTCCCAAGGGCTTGATGCTCTTAACCAATCTCTCTCAGACACTATAACATCAGACTCTTTGTGGTGTCCTCCAAATATGACTAACTACATGGGACAGATGGCTGTGGCCATGAACAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCTGATAATCTGAGGCACCAGACCATTCACCGTCTGCATCAACTTCTAACAACACGCCAAGCAGCGAGGTGTTTGGTGGCCATATCTGAGTACTTCCATCGTCTCCGAGCCCTGAGTTCTCTGTGGTTGGCACGCCCTCGCCAAGAGTAG 1515 0.4554 MGFSIGIELEAEQQEQEAKFLGSSLIMASSVKSTNSTTQLEPLAPPPHLHHQQPQHHFHHHQIPDQQISFGMMPSSSSASIPGNYLSKDSGAYDLGELDQAFFLYLDGQADPSSAQDQRQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVNMEIPSTQTSGTKRPPEPSMAKPNPHTEAPSAPEPPTAVKREGNRKGTTSSSEQEAPKTPDPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGMLIGGSALLGGEQGIPMSMSGISSEAAMFDMEYARWLEEHHRIVCELRAAAQEHLHENELRLYVDNCLAHYDQVLNLKSIVAKTDVFHVVFGMWKTPAERCFMWIGGFRPSELIKVILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTITSDSLWCPPNMTNYMGQMAVAMNKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWLARPRQE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2763 504 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 255 IPR004827 GO:0003700|GO:0006355
Ssu7g2763 504 MobiDBLite consensus disorder prediction 111 131 - -
Ssu7g2763 504 Pfam Seed dormancy control 304 378 IPR025422 GO:0006351|GO:0043565
Ssu7g2763 504 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 216 231 IPR004827 GO:0003700|GO:0006355
Ssu7g2763 504 SUPERFAMILY Leucine zipper domain 213 255 IPR046347 GO:0003700|GO:0006355
Ssu7g2763 504 MobiDBLite consensus disorder prediction 110 216 - -
Ssu7g2763 504 MobiDBLite consensus disorder prediction 168 182 - -
Ssu7g2763 504 SMART brlzneu 209 262 IPR004827 GO:0003700|GO:0006355
Ssu7g2763 504 MobiDBLite consensus disorder prediction 193 208 - -
Ssu7g2763 504 CDD bZIP_HBP1b-like 213 265 - -
Ssu7g2763 504 Gene3D - 212 262 - -
Ssu7g2763 504 MobiDBLite consensus disorder prediction 140 165 - -
Ssu7g2763 504 ProSiteProfiles DOG1 domain profile. 286 500 IPR025422 GO:0006351|GO:0043565
Ssu7g2763 504 Pfam bZIP transcription factor 213 251 IPR004827 GO:0003700|GO:0006355
Ssu7g2763 504 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 98 503 - -
Ssu7g2763 504 PANTHER TRANSCRIPTION FACTOR TGA9 98 503 - -
Ssu7g2763 504 Coils Coil 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2763 Ssu-Chr7 57253073 57260818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2763 83 504 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.334 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu7g2763 DOG1 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2763 K14431 - gmx:100800059 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2763 7 57253073 57260818 Ssu7g2763 7 57253073 57260818 ECH
Ssu4g1432 4 23869164 23875700 Ssu7g2763 7 57253073 57260818 PCT