Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2760 ATGTTGGCCATGGATGAATCACCGGCGAACTGGGGGAGCAAAATCGGAGCACAAGGAAACGAGGAACAAGAAGATGACTACATGGGTGACCTTTCCCAGTTTCTTCCTTCAGATGCATTCGACCCGCCGAAGTTGTCTTCATCCAAAAAGATTTCCAGCCAGAAAGATCCTTCAGTCAACTATTCCAAGAACCGGTTGAAAACTCTTAGCTGGCAAGAGCGGCGGAAActtgaaagagaaaggaagcAACAAGAAGAGGATGAGCAAACGTTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAGATGGGTTACACTCCAGGCTCTGCCCTTGGAAAGCAGGGCTCGGGCAGGGCCGAACCGGTGGGCATTGAAATTCGACGGTCACGAGCTGGTGTAGGCTTAGAAGATCCCCACaaggagaagaggaaaaagGAGGAAATCATGATGGACAGGAAAAGGAGGAAAGAGGAGGACCTAATGAAAGAATTTGGGTCTAGGCAGAAGTCACAGTGGCAGAGTAGGagagttataattaattataataaggcAAAGGCTGCCCTTGATCAATTGGAGCATAGGGAAATTGTGGAGCCACAGAAGAATGATGATGATGCAGAgggtgaagaagaagaagaggaagaaataaCAGAAGAGGAATTGCACGATGTTTTGATGAAACTGAgggatgaatttaattattgcCTCTTTTGTGGATGCCAATACGAATCAAGGGATGCCCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAA 807 0.4139 MLAMDESPANWGSKIGAQGNEEQEDDYMGDLSQFLPSDAFDPPKLSSSKKISSQKDPSVNYSKNRLKTLSWQERRKLERERKQQEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMMDRKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLEHREIVEPQKNDDDAEGEEEEEEEITEEELHDVLMKLRDEFNYCLFCGCQYESRDALLANCPGTNEDDH 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2760 268 MobiDBLite consensus disorder prediction 198 227 - -
Ssu7g2760 268 MobiDBLite consensus disorder prediction 68 92 - -
Ssu7g2760 268 MobiDBLite consensus disorder prediction 138 173 - -
Ssu7g2760 268 PANTHER UNCHARACTERIZED 23 268 IPR039249 -
Ssu7g2760 268 Coils Coil 151 171 - -
Ssu7g2760 268 Pfam G-patch domain 100 143 IPR000467 GO:0003676
Ssu7g2760 268 ProSiteProfiles G-patch domain profile. 100 146 IPR000467 GO:0003676
Ssu7g2760 268 MobiDBLite consensus disorder prediction 46 67 - -
Ssu7g2760 268 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 23 268 - -
Ssu7g2760 268 MobiDBLite consensus disorder prediction 1 95 - -
Ssu7g2760 268 Coils Coil 74 94 - -
Ssu7g2760 268 MobiDBLite consensus disorder prediction 137 180 - -
Ssu7g2760 268 Pfam Domain of unknown function (DUF4187) 217 268 IPR025239 -
Ssu7g2760 268 SMART DUF4187_2 214 268 IPR025239 -
Ssu7g2760 268 SMART G-patch_5 98 144 IPR000467 GO:0003676
Ssu7g2760 268 MobiDBLite consensus disorder prediction 210 227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2760 92 142 C2H2 Transcription Factor Family AT5G26610 45.098 9.30e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2760 - - gmx:100777380 447.203