Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2757 ATGCTCAAATCTCAATTGAATAGTGATCAATGTTGTAGATCTCGtgaaaaatctaacaaaatccCGTGTGGAAATTTTCCTGGCAGCAATTTTCTTCCACTTGAACAACCTAAGTTGTTCATTGATGATGTTGCCTCAATTAGTAGAAGCCTATCAATTCCTTATATAGGAAATCAGGATCAAGCAGTTTCTTGTGGCTCATATAATTTACCTGCTGCACAGCTTAGCTTCTCTTCTCAGCAAGAGATGCTGTCTCCAACGGGTAGCATGTCAGCTAATGCTGGAACCGCTACTTCAAATGGATCAGTAGTCTCAAGTAAAACACGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAGTCAACTCAGGGGAAATCTGACAAAAGAACCAATGTAGAGAATGTGCATCTTGATGTCAAAACTGGCTTGCAAATTAGAGAGGCACTTCAGTTGCAGTTAGATGTTCAAAGGCGTCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAACAGCTGAAGATGATGTTTGATCAACAGCAAAAGACAAGTGATAGCCACTTGAATACTCAGAATTTGGACAACACCACCAATAATGATAGACCAATTAGCTCTAAAGATAATCTGGTTTCCATTTCTGAAGGGTCTGAAAATTCCTTATTGTCCAAGATAAGTTAG 840 0.3845 MLKSQLNSDQCCRSREKSNKIPCGNFPGSNFLPLEQPKLFIDDVASISRSLSIPYIGNQDQAVSCGSYNLPAAQLSFSSQQEMLSPTGSMSANAGTATSNGSVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSDKRTNVENVHLDVKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSDSHLNTQNLDNTTNNDRPISSKDNLVSISEGSENSLLSKIS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2757 279 Pfam MYB-CC type transfactor, LHEQLE motif 190 237 IPR025756 -
Ssu7g2757 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 164 IPR017930 -
Ssu7g2757 279 MobiDBLite consensus disorder prediction 231 279 - -
Ssu7g2757 279 Gene3D - 106 165 - -
Ssu7g2757 279 Pfam Myb-like DNA-binding domain 111 160 IPR001005 -
Ssu7g2757 279 SUPERFAMILY Homeodomain-like 105 161 IPR009057 -
Ssu7g2757 279 Coils Coil 193 213 - -
Ssu7g2757 279 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 162 IPR006447 GO:0003677
Ssu7g2757 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 276 IPR044848 GO:0003700
Ssu7g2757 279 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2757 Ssu-Chr7 56698254 56700020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2757 96 257 G2-like Transcription Factor Family AT4G28610 52.023 1.07e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ssu7g2757 Myb_DNA-binding 2.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2757 - - gmx:100780919 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2757 7 56698254 56700020 Ssu7g2757 7 56698254 56700020 ECH