Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2754 ATGATTGGAATTTCCTTTGTCCTCTCGCATGCAATGGCTTCCTTACGCAATATCTTCCTCATATTTTGCTTGTTTATTCCTCTGGCCTCCTTATGGCCATACCCAGTTGCAGTTCATCCAGCCAGTGATGTTCCAACCAATGTGACCAAGCGCTTCTTCTTCCCTGATTACAACATCAGCAACAACCCCAGACTTGTCTATGATGTGAAGCTCCTGGGCAGTGCCAGGTTCTCACATGAAAAGGGTGTTCTTCAAATCCCCAGTGAATCCCAAGACACAAACATAAGATACCAAGCAGGGCCATGGCCTGGCATGCTCAACGACGCTTGTGAGAATGACTACAAAGCAGTGGCAGTGGAGTTTGCCACAAGAAAGAACCCAGAGTTTGGAGATCCGAATGACAACCATGTTGGCATCAACTTAGGTACCACAGTATCTTCTAAAATTATCAATGTTTCTGATGTTGGAGTGTCCCTTAAGGATGGTTTTGTTCACCGTGCTTGGATCACCTATGATGGTCCTCAAAGGAGAATGGACATTCGTCTTGGACTGGCCAACCAAGAGGTTTATCTTACCAAGCCTATCTTCTCAGAACCCGTGAATCTCTCTCCTTATCTGAATGAGTACATGTTTGTAGGGTTCTCAGCTTCCACAGGTAACCACACCCAAATCCACAACATACTATCTTGGAACTTCACTTCCACCAGCCAAGCTTTTCTTCGTTTCCCTTCATCTGAAACCTGCCAGGGAAAGATCTTACATGAGAATAGCACAACACCACCAACTTCCAAGAAGTCTGCCAAGTATAAGCCACCGCTAAGCTTTTTGATTTTTGTGGCTGCTATGGCATTGGCTCCGGCTCTTCTCCTCGGCTTTTACTTCATCAGTGAGCACAGGAGAAATGCTGCCAAGTTAAACACTTCAGTGGAGACAGAGATTCTGCGTGAGATAGAGTTGCTTGGTATTGATTCTAGAGGAGCATACTGCAGAAGAAAGCTTCGTGATGGCAGCCAGGTAGCTGTGAAAAGGTTCTCAGCTCAGTTTCTCGACACGTACGGATCGCACAAGAGGCGTTTGTTGAAGGAAATCGAAGGCATTAGCCATGTTCACCACCCGAATTTGCTTCCCGTTAGAGGCTGGTGTCAAGACAACCATGAAATCATGGTGGTCTATGACTTTGTCCCCAATGGCACCCTGGATAAATGGCTATTCAGGACCGGTTTTCTTCCGTGGACTCGGCGGTTCAAAGCTATTAAAGATGTAGCTGATGGCTTGAGCTTCCTCCACACTAGGCAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAACTTCAGAGCAGTTTTGGGTGATGTTGGGTTTGTATTGTTGGGGGCAGAATCAAAACAGTTTGAGTCGGCAGTGTGCCAAGATGCAGATGTGTTTGAGTTTGGCATCCTGGTGTTGGAGGCTATGAAGCCCGGATACTCCAAAAATGGAAAAGTATCGGTATCATACCCGTGTGATAGCCGGAAGGGCAAGCGAGGAGGAAAAAAGGAGGGAAATCCAAAAGAGAGGAACGTATTGGATTATTTTTGGAACTTGCATGAGACTGATCAGAAAGTGAAGCTGGTGGACAGAAGGATGGGATCATTGATCAACTTGGAGCAGGCAATTCGTGTTCTCGAAATGGGATTGCTTTGCACTCTGAATGAGAGCAAAGGCAGGCCCTCAATGGAGCAAGTGGTGGAGTTTCTTCTTAACATGGAGAAGCCCATTCCTGAGCTGCCAAGAACTCGCCCTGTTGCCTTGTTCCCCCTGCAATAG 1818 0.4659 MIGISFVLSHAMASLRNIFLIFCLFIPLASLWPYPVAVHPASDVPTNVTKRFFFPDYNISNNPRLVYDVKLLGSARFSHEKGVLQIPSESQDTNIRYQAGPWPGMLNDACENDYKAVAVEFATRKNPEFGDPNDNHVGINLGTTVSSKIINVSDVGVSLKDGFVHRAWITYDGPQRRMDIRLGLANQEVYLTKPIFSEPVNLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSETCQGKILHENSTTPPTSKKSAKYKPPLSFLIFVAAMALAPALLLGFYFISEHRRNAAKLNTSVETEILREIELLGIDSRGAYCRRKLRDGSQVAVKRFSAQFLDTYGSHKRRLLKEIEGISHVHHPNLLPVRGWCQDNHEIMVVYDFVPNGTLDKWLFRTGFLPWTRRFKAIKDVADGLSFLHTRQLAHKNLKCSSVFLDVNFRAVLGDVGFVLLGAESKQFESAVCQDADVFEFGILVLEAMKPGYSKNGKVSVSYPCDSRKGKRGGKKEGNPKERNVLDYFWNLHETDQKVKLVDRRMGSLINLEQAIRVLEMGLLCTLNESKGRPSMEQVVEFLLNMEKPIPELPRTRPVALFPLQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2754 605 SUPERFAMILY Concanavalin A-like lectins/glucanases 96 236 IPR013320 -
Ssu7g2754 605 Gene3D Phosphorylase Kinase; domain 1 320 394 - -
Ssu7g2754 605 SUPERFAMILY Protein kinase-like (PK-like) 311 596 IPR011009 -
Ssu7g2754 605 CDD lectin_legume_LecRK_Arcelin_ConA 92 235 IPR001220 GO:0030246
Ssu7g2754 605 Gene3D - 83 243 - -
Ssu7g2754 605 ProSiteProfiles Protein kinase domain profile. 314 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2754 605 Pfam Protein tyrosine and serine/threonine kinase 331 459 IPR001245 GO:0004672|GO:0006468
Ssu7g2754 605 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 102 600 - -
Ssu7g2754 605 Gene3D Transferase(Phosphotransferase) domain 1 395 590 - -
Ssu7g2754 605 PANTHER - 102 600 - -
Ssu7g2754 605 Pfam Legume lectin domain 99 237 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2754 Ssu-Chr7 56514889 56518250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2754 40 602 Receptor kinase-like Gene Family AT5G55830 27.934 1.90e-59 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu7g2754 PK_Tyr_Ser-Thr 1.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2754 - - gmx:100807767 859.366