Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2734 ATGCACCTCCCTTGGTTAGTCAAATATCAATTAGCAGCTACCATCTTCATTATCATTGCCGTTACCAAAGTTACATgcttatattatttcaatttctcTTCCTTCAAAGATGAAACACATTTATTGCTGATCAACAAGATTTCGAGAATATACTTAGGTGCCATCCAAGTGACCCCTGATATTCGTGGTCCCATACACAATCATTCTGGACGTGCTTTCTATAACAAGCCATACAAACTTTGGAGCCAGAAGAAGAACCAAACTGCTTCCTTCAACACCACTTTTGTGCTCAACATCAGTCCCCAGACTAACCCTGGTGGAGAAGGCTTGGCCTTCATCCTAACTTCAGATACCACTCTACCAGAAAACAGTGCAAGAGAATGGCTAGGTATTGTGAATGCTACTTCCAATGGAACTTCAAAAGCTGGGATTCTAGCAGTGGAATTTGACACAAGAAAAAGTTTCTCACAAGATGGCCCTGACAACCATGTTGGCATCAACATAAATAGCATCAACTCCATCCAACAGGTTCCATTACTCAACACTCGGGTCAATCTTTCATCAGGTATAGATGTAACAATCAAAATTCAGTACGTCAATGACACAATATCAGTTTCTGGTTCCATGAATGGAACTTCAGAAGAATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTAACTTCCCATCTTCAACAAGAGGTTTACCTTGGTTTCTCTGCCTCAACAAGTAACTACACGGAGCTGAACTGTGTAAAATCATGGGAATTCAGTGGTGTTGAAATTGGAGATGATGATAACAGTCTGGTGTGGGTTTACGTCACTGTCCTAACAGTGATTGTTATTACTATCATAGGAGGGTTGGTGATCTTTTTCTTGTGTTGGCAAAGGAAACGCTATATGGAGAAGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAGCATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAGGCAATTAACAAAAGCAACAGGTGGATTCAGCCCTCAAAACAAGCTTGGAGAAGGAGGATTTGGAACTGTGTATAGAGGCCTATTGGAAAATAAGGAGGTAGCTGTTAAGAGAGTCTCAAAGAACTCACGCCAAGGGAAGCAAGAATTTGTGGCAGAAGTCACAACAATTGGAAGCCTTCACCACAGAAATTTGGTGAAACTCACTGGCTGGTGCTATGAGAACGGAGAGCTTCTCCTTGTCTATGAGTTCATGCCTAGTGGAAGCCTAGACAAGTACCTCTTTGGTGAACAAAATTTTGGTGACGGCCTTGAAGAGGAGTGTTCTTTAAGTCTGAATTGGGAAACTAGGCACAGTGTGATTCATGGGGTGGCTCAAGCACTGGACTATCTTCACAATGGGTGTGAGAAGAGGGTGCTTCACAGAGACATCAAGGCCAGCAACATAATATTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACCATTCAGCAGAGAAATGAAACACACCACTCAACAAAGGAGATTGCAGGCACACCAGGGTACATGGCCCCAGAAACCTTTCTGACTGGAAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAGGTAGTGTGTGGAAGGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGAGCTATATGGGAAGGGGAGAATAGTTGGTGCTGTGGATGCAAGGTTGAAGAAGGAGGAGATTAAGGAGGAAGAAGTGGAAGGTGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAATCCACACCATAGGCCATCCATGAGAACTGTTCTTCAGGTTCTGAATGGGGAAGCACCTCCACCTGAGTTGCCTAAGGAAAGACCAGTTTTTATGTGGCCTGCTATGCCTCCATCTTTCAAAGAAGCTGAAGATAGCTCCCTCATCCAGGGAACACTCACTCCATTCACTGAAATCACTGGCCGATGA 2004 0.4351 MHLPWLVKYQLAATIFIIIAVTKVTCLYYFNFSSFKDETHLLLINKISRIYLGAIQVTPDIRGPIHNHSGRAFYNKPYKLWSQKKNQTASFNTTFVLNISPQTNPGGEGLAFILTSDTTLPENSAREWLGIVNATSNGTSKAGILAVEFDTRKSFSQDGPDNHVGININSINSIQQVPLLNTRVNLSSGIDVTIKIQYVNDTISVSGSMNGTSEESMETLLVSPPLNLTSHLQQEVYLGFSASTSNYTELNCVKSWEFSGVEIGDDDNSLVWVYVTVLTVIVITIIGGLVIFFLCWQRKRYMEKPEDAYPRIEDQIQHSSMAPKKFRLRQLTKATGGFSPQNKLGEGGFGTVYRGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYENGELLLVYEFMPSGSLDKYLFGEQNFGDGLEEECSLSLNWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIILDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGNVYAQDDYKNSIVYWVWELYGKGRIVGAVDARLKKEEIKEEEVEGVLVLGLACCHPNPHHRPSMRTVLQVLNGEAPPPELPKERPVFMWPAMPPSFKEAEDSSLIQGTLTPFTEITGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2734 667 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
Ssu7g2734 667 Pfam Legume lectin domain 30 263 IPR001220 GO:0030246
Ssu7g2734 667 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Ssu7g2734 667 SMART serkin_6 338 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2734 667 Gene3D - 28 268 - -
Ssu7g2734 667 CDD STKc_IRAK 344 622 - -
Ssu7g2734 667 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Ssu7g2734 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 260 IPR013320 -
Ssu7g2734 667 ProSiteProfiles Protein kinase domain profile. 338 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2734 667 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 655 - -
Ssu7g2734 667 Pfam Protein tyrosine and serine/threonine kinase 341 619 IPR001245 GO:0004672|GO:0006468
Ssu7g2734 667 SUPERFAMILY Protein kinase-like (PK-like) 319 620 IPR011009 -
Ssu7g2734 667 PANTHER - 5 655 - -
Ssu7g2734 667 CDD lectin_legume_LecRK_Arcelin_ConA 30 259 IPR001220 GO:0030246
Ssu7g2734 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2734 Ssu-Chr7 55948104 55950107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2734 15 635 Receptor kinase-like Gene Family AT5G10530 38.629 8.60e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu7g2734 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2734 - - gmx:100785031 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2734 7 55948104 55950107 Ssu7g2734 7 55948104 55950107 ECH