Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2710 ATGGCTATGGCGCCTTTACTCTCAGCCCGCCGCTTCTTCAAAACACCGTTTCCCCTCTTCTCCTTGTGTTTCTCATTCTCCACCGCCTCATCACCACCGCCACCGCCTCCCATCCGAGTCGCCCTCACCGAGTCCGCGGGCCGCGCCGTCTTCGCCACTCGCCCCATCGCCGCCGGCGACCTCATCCACACCGCCAAGCCCGCCGTCTGCCACCCCTCCGCCCACTCCGCCTGCTACTCCTGCCTCGCCACGCTCCCCAACTCCGAACCTCACCAGCGCGTGCCCTTTTGCAGCCAACACTGCCACCAACGCTCCAAGgGATATTACGATGTTGAGATGAAAGCGAGCTGGGTGGCTTTTGATGACTATTTCCGGACCCGTGGTTTGAAGTATCCCTTTCTGGTTAAGCGATTGGCTTGCATGGTCATATCAGGAGATGCCAGAAGTGACACTCTTGACATACTTCAGCCTGCCAATTTGACACCTGAGATGGTTTTAAAGATGGAAGAGGAGTTTGTCTTCCTAAAGGATGCCTTCACAAAGGCACTTATTGCAGATGAACATATTGCCTTTTTAACTAAGCAATGGTACATTAATGTTCTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCCGGAGGACTATATGAAGATCTTCTTTCATCAGCTGTTGCATCTGTGGAAGCTGAGGCAGCTGTTGGAAATGCTGTCTATATACTTCCATCCTTCTACAATCATGACTGTGATCCTAATACACACATTATATGGATAGATAGTGCTGATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGACCGTGATGCTCGGCGAGAGCTACTGTTTCGaggttttggttttcaatgCAATTGTAGTAGGTGCTTGCATGGCGATTAG 942 0.5011 MAMAPLLSARRFFKTPFPLFSLCFSFSTASSPPPPPPIRVALTESAGRAVFATRPIAAGDLIHTAKPAVCHPSAHSACYSCLATLPNSEPHQRVPFCSQHCHQRSKGYYDVEMKASWVAFDDYFRTRGLKYPFLVKRLACMVISGDARSDTLDILQPANLTPEMVLKMEEEFVFLKDAFTKALIADEHIAFLTKQWYINVLARIRINAFRIELAGGLYEDLLSSAVASVEAEAAVGNAVYILPSFYNHDCDPNTHIIWIDSADAKLKALRDIDEGEELRICYIDASLDRDARRELLFRGFGFQCNCSRCLHGD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2710 313 CDD SET_SMYD 236 309 - -
Ssu7g2710 313 Gene3D - 77 122 - -
Ssu7g2710 313 SMART set_7 36 289 IPR001214 GO:0005515
Ssu7g2710 313 Gene3D - 123 208 - -
Ssu7g2710 313 SUPERFAMILY SET domain 34 309 IPR046341 -
Ssu7g2710 313 Gene3D SET domain 49 309 IPR046341 -
Ssu7g2710 313 ProSiteProfiles SET domain profile. 36 283 IPR001214 GO:0005515
Ssu7g2710 313 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 42 310 - -
Ssu7g2710 313 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 42 310 - -
Ssu7g2710 313 Pfam SET domain 47 282 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ssu7g2710 SET 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2710 - - gmx:100801270 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2710 7 54634913 54640646 Ssu7g2710 7 54634913 54640646 ECH