Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2691 ATGGCTTTCCCTCCCCACGTAGTAGAGGACTGCATGGGCCTCCTCAAACTCTTCAGCGACGGCACCGTTTTCCGCTCCAACATACAATTCCAAGAAGAACAACCTTCACCCACCCAACACGACAACCTCGTGGCCTTCAAAGACTACCTCTTCCACAAAAGATTCAACCTCCACCTCCGTCTCTACAAACCCAAATCCAACAAGGACATCAGCGACAACGATCACGGTGACGACGAGAAGTTCCCCGTGGTGATGTTCCTCCACGGCGGAGGCTTCTGCTTCGGCTCGCCCGCGTGGCCGCACATTCACGCCTGCTGCGCGCGCCTCGCCGCGGGCCTCCGCGCCGCCGTGGTGGCGCCCGACTACCGCCTCGCGCCGGAGAACCGCCTCCCCTCGGCGGTGGAGGACGGCGTGGAGGCGGTGCGGTGGCTGCAGCGGCAGGCGCTCGGGGACGATGACGCGGGGGTCGCGCGGGGCGTTGACTTTGACCGCGTGTTCGTGGTGGGTGATTCCTCTGGCGGGAACATTGCGCACCACTTAGCGGTTCAGTTCGGACCCGGTTCGAGGGAGATGGACCCGGTTCGAGTACGAGGTTACGTGCTGCTGGGGCCGTTTTTCGGTGGGGTGGTTCGGACAAGGTCGGAGGTGGGTCCACCGGAACAAATGCTGACCCTCGAGATGCTCGACAGATTTTGGAGGCTGTCAATACCTATTGGAGAGACCAGAGATCACCCATTGGCAAACCCATTTGGACCTAGCAGTCCAAACCTTGGACATGTGAAGCTTGACCCTATTTTAGTGATAGTTGGGAGCAATGAATTGCTGAAGGACAGAGCAGCGGATTATGCATCAAGGTTAAAAGAACTAGGGAAAAACATTGAATACGTTGAGTTTAAGGGGAAGGAACACGGCTTTCTCACTCATGATTCATACTCAGAGGCTTCGGAAGAGGTCGTGCAAATCATTAAACGATTCATGCTCGAAAAttctaattag 996 0.5643 MAFPPHVVEDCMGLLKLFSDGTVFRSNIQFQEEQPSPTQHDNLVAFKDYLFHKRFNLHLRLYKPKSNKDISDNDHGDDEKFPVVMFLHGGGFCFGSPAWPHIHACCARLAAGLRAAVVAPDYRLAPENRLPSAVEDGVEAVRWLQRQALGDDDAGVARGVDFDRVFVVGDSSGGNIAHHLAVQFGPGSREMDPVRVRGYVLLGPFFGGVVRTRSEVGPPEQMLTLEMLDRFWRLSIPIGETRDHPLANPFGPSSPNLGHVKLDPILVIVGSNELLKDRAADYASRLKELGKNIEYVEFKGKEHGFLTHDSYSEASEEVVQIIKRFMLENSN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2691 331 Coils Coil 272 292 - -
Ssu7g2691 331 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Ssu7g2691 331 Gene3D alpha/beta hydrolase 14 327 IPR029058 -
Ssu7g2691 331 SUPERFAMILY alpha/beta-Hydrolases 5 326 IPR029058 -
Ssu7g2691 331 PANTHER CARBOXYLESTERASE 15-RELATED 4 327 - -
Ssu7g2691 331 PANTHER ARYLACETAMIDE DEACETYLASE 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2691 Ssu-Chr7 54098691 54105462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2691 7 325 Carbohydrate Esterase AT5G16080 33.436 9.46e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2691 - - gmx:100801473 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2691 7 54098691 54105462 Ssu7g2691 7 54098691 54105462 ECH
Ssu4g0750 4 11581670 11585450 Ssu7g2691 7 54098691 54105462 PCT