Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2684 ATGGAGAAAGCAAATACGTCATTAGTGAGGACGAAATCGGATCAGCTGGTGGAGTCAATGGTGGCGGCTCTGAAGTCGCCGGCGTCGAGCGACCACTCGGCGAACGGGGTGGCGGAAGGCGGCGGGACCCTTTCGAGGAAGTCGAGCCGGCGGCTGACGGGGGCGTCGCCGGGGCGCGGCGGCGGGAAGAACGCGCACATAAGGAAGTCGAGGAGTGCTCAGATAAGCCAAATGAAGCTGGAGCTTGATGATGTGAGTAGCGGTGCCGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCCTTCTCCTTCACTGGCTTCACTATGCCCCCTGAAGAAATCGCTGATTCCAAACCCTTCAGCGACGATGATATCCCTGAGGATATCGAAGCTGGACCTAGGACAAAGTTTCAAACGGAACCTACTCTACCGATATATCTAAAGTTCACGGATGTGGCCTACAAGATAGTGATCAAAGGCATGACAACAAGTGTGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTCTAAACCTTCTTGGAGGCAGGTTAAGCCAGCCTATAAGTGGTGGTTCTATCACTTACAATGACCAACCATATTCCAAGTTCCTTAAGAGCAGGATAGGGTTTGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATATGCAGCCCGGCTAAGACTGCCAAAGACATTCACAAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGCGGCTCCTTTGTCCGTGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCaacccttctcttctttttcttgatgAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGAATTACTTCCAGTCTGTAGGATGTTCACCACTTATTTCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAAGTGCAGATGGGAAATGCAGAAGCTGAAACACACAGTGGTAAACCATCACCAGCAGTTCTACATGAGTATCTGGTGGAGGCCTATGAAACTCGAGTAGcagaaacagaaaagaaaagattaatgGTTCCTATACCCCTTGATGAAGCACTGAAGACTAAAGTGAGTTCTCATAAAAGACAATGGGGAGCAAGTTGGGATGAGCAATATTCCATACTATTTTGGAGAGGAATCAAAGAACGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAAGCAGGACTGCTATTCTTTATTGCTGTTTTCTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGATATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTGCCAGTCCTTTTTCTACTTGTTGTTTATTTCATGGCTGGTCTCAGACTCTCTGTTGCCCCCTTCTTCCTCACCATTCTTACAGTTTTTCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATCGGGGCCACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGAGTCCCCGTATTTTTTTCTTGGATCCGGTACATGTCTTTCAACTACCACACCTACAAACTTCTGCTCAAGGTGCAGTATGAACACATCACGCCTACCGTAAACGGGATCAGAATTGATAATGGTACAACAGAGGTAGCTGCTCTAATAGCCATGGTTTTTAGTTACCGTTTCTTGGCATATCTTTCTTTAAGGAGAATGAAACTTCAATCTGGAGCTTAA 2235 0.4492 MEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVAEGGGTLSRKSSRRLTGASPGRGGGKNAHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIYLKFTDVAYKIVIKGMTTSVEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSVGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETHSGKPSPAVLHEYLVEAYETRVAETEKKRLMVPIPLDEALKTKVSSHKRQWGASWDEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPVFFSWIRYMSFNYHTYKLLLKVQYEHITPTVNGIRIDNGTTEVAALIAMVFSYRFLAYLSLRRMKLQSGA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2684 744 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 738 - -
Ssu7g2684 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 394 IPR003439 GO:0005524
Ssu7g2684 744 Gene3D - 148 389 IPR027417 -
Ssu7g2684 744 CDD ABCG_EPDR 145 376 - -
Ssu7g2684 744 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 10 738 - -
Ssu7g2684 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 386 IPR027417 -
Ssu7g2684 744 SMART AAA_5 180 371 IPR003593 -
Ssu7g2684 744 Pfam ABC-2 type transporter 351 412 IPR043926 GO:0140359
Ssu7g2684 744 Pfam ABC transporter 171 322 IPR003439 GO:0005524
Ssu7g2684 744 ProSitePatterns ABC transporters family signature. 294 308 IPR017871 GO:0005524
Ssu7g2684 744 Pfam ABC-2 type transporter 489 698 IPR013525 GO:0016020|GO:0140359
Ssu7g2684 744 MobiDBLite consensus disorder prediction 23 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2684 Ssu-Chr7 53926224 53936861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2684 170 408 Calmodulin-binding Proteins AT2G36910 29.796 4.51e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2684 K05681 - gmx:100798801 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2684 7 53926224 53936861 Ssu7g2684 7 53926224 53936861 ECH
Ssu4g0758 4 11700959 11709369 Ssu7g2684 7 53926224 53936861 PCT