Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2675 ATGGGAAACAACTGCATTGGATCGAGAACCTCTTCTTCTAAAGATGGAACGCTTGGCTCTTCTTTTTCAAGGTCATTCTGCTGGTCACGTGGGCACAAGAAAGATGCTTCTCATGCACAGAAAGGTAGCAAAAAGAGCATAAAAACCACAGAAACAAAGCCTCCACAGGTAGTGAAAATTGAGAGGGAGGAGGTGAAGCCGCCTCCACCCAAAGAGACTAAACCTCCTccagaacaaacaaaacatgTGGAGGGAGCAGCAAAACCAAAGAGACCCCACAATGTGAAGAGGGTAGCAAGTGCAGGCCTCAAAAGAGATTCTGTTTTGCTAAGAAAAACTGGTAACCTTAAGGAGTTTTACAATTTGGGACAGAAGCTTGGACAAGGCCAGTTTGGAACCACTTTCCTGTGTGTAGAAAAGGCCACTGGGAAAGAGTATGCTTGCAAGTCCATATTGAAGAGGAAGCTGCTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGCTGGGAGTCCTAATGTGATCTCCATTAAGGAGGCTTTTGAGGATGCTGTAGCAGTTCATGTTGTTATGGAGCTGTGTGCAGGGGGTGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAGGCAGCCAAGCTTGCAAGGACTATAGTTGGTGTGATTGAGTCTTGCCACTCCCTTGGAGTGATGCATAGGGATCTTAAGCCTGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTCAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTCAGTGATGTAGTAGGAAGTCCTTATTATGTAGCACCTGAAATTCTACGCAAGCGTTATGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATAATATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGATATATTTGAGGCGATTTTGCATTATGAACTTGATTTCTCATCGGATCCTTGGCCTGCTATATCTGCAAGTGCAAAAGACCTGGTTAGGAAGATGCTTGTCAGAGATCCTAGTAAACGGATAACAGCTTATGATGTTCTTCGTCACCCCTGGATTCATGTTGATGGAGCAGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGCCGCCTAAAGCAGTTTTCTGCTATGAACAAACTCAAGAAAATGGCTCTCAGAGTTATAGCAGAGAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAAGTTTGGTGCCAATCTCAATGAATCTGAAATTTACGACCTTATGCAAGCAGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGGTTGACAGGGAAGATCATTTAGTTGCAGCTTTCTCTTATTTTGATAAAGACGGAAGTGGCTACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCATAGGGGATGTCCGCTTGGAGGAAATGATCCGAGAAGTTGATCAGGATAATGATGGACGAATAGACTACAATGAATTTGTGGCTATGATGCAGAAAGGCAATGCAGATTTGGGTAAGAGGGGTCGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAAGCACTACcggtattttaa 1758 0.4255 MGNNCIGSRTSSSKDGTLGSSFSRSFCWSRGHKKDASHAQKGSKKSIKTTETKPPQVVKIEREEVKPPPPKETKPPPEQTKHVEGAAKPKRPHNVKRVASAGLKRDSVLLRKTGNLKEFYNLGQKLGQGQFGTTFLCVEKATGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFSDVVGSPYYVAPEILRKRYGPEADVWSAGVIIYILLSGVPPFWGESEQDIFEAILHYELDFSSDPWPAISASAKDLVRKMLVRDPSKRITAYDVLRHPWIHVDGAAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLVAAFSYFDKDGSGYITQDELQQACEEFGIGDVRLEEMIREVDQDNDGRIDYNEFVAMMQKGNADLGKRGRKGSTSFRIGFREALPVF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2675 585 Gene3D Transferase(Phosphotransferase) domain 1 206 384 - -
Ssu7g2675 585 Pfam Protein kinase domain 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2675 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 569 - -
Ssu7g2675 585 ProSiteProfiles Protein kinase domain profile. 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2675 585 MobiDBLite consensus disorder prediction 1 95 - -
Ssu7g2675 585 ProSiteProfiles EF-hand calcium-binding domain profile. 531 562 IPR002048 GO:0005509
Ssu7g2675 585 SUPERFAMILY EF-hand 417 558 IPR011992 -
Ssu7g2675 585 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Ssu7g2675 585 PANTHER CALCIUM-DEPENDENT KINASE 30 569 - -
Ssu7g2675 585 MobiDBLite consensus disorder prediction 1 27 - -
Ssu7g2675 585 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Ssu7g2675 585 Pfam EF-hand domain pair 497 557 IPR002048 GO:0005509
Ssu7g2675 585 MobiDBLite consensus disorder prediction 28 48 - -
Ssu7g2675 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Ssu7g2675 585 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Ssu7g2675 585 CDD EFh 497 557 IPR002048 GO:0005509
Ssu7g2675 585 CDD STKc_CAMK 119 377 - -
Ssu7g2675 585 Pfam EF-hand domain pair 438 488 IPR002048 GO:0005509
Ssu7g2675 585 ProSitePatterns Protein kinases ATP-binding region signature. 126 153 IPR017441 GO:0005524
Ssu7g2675 585 SUPERFAMILY Protein kinase-like (PK-like) 119 379 IPR011009 -
Ssu7g2675 585 SMART serkin_6 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g2675 585 Gene3D - 385 562 - -
Ssu7g2675 585 SMART efh_1 425 453 IPR002048 GO:0005509
Ssu7g2675 585 SMART efh_1 531 559 IPR002048 GO:0005509
Ssu7g2675 585 SMART efh_1 497 525 IPR002048 GO:0005509
Ssu7g2675 585 SMART efh_1 461 489 IPR002048 GO:0005509
Ssu7g2675 585 Gene3D Phosphorylase Kinase; domain 1 122 205 - -
Ssu7g2675 585 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Ssu7g2675 585 MobiDBLite consensus disorder prediction 55 91 - -
Ssu7g2675 585 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Ssu7g2675 585 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Ssu7g2675 585 CDD EFh 426 485 IPR002048 GO:0005509
Ssu7g2675 585 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2675 Ssu-Chr7 53723743 53728122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2675 43 576 EF-hand Containing Proteins AT3G10660 75.046 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ssu7g2675 Pkinase 2.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2675 K13412 - gmx:100783079 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2675 7 53723743 53728122 Ssu4g0765 4 11829762 11834155 PCT