Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2633 ATGTCCCAACTGAACGGCGCGTACTACGGGCCCTCCATTCCGCCGCCGCGGAAATCCTACCACCGCCCCTCGCGCGGCGGCGGGTGCCTCAGCTGCTGCTGCGGCTGCATCTTCAACTGCATCCTCGGCCTCATCTGCAAAATCCTCACCGCAGTCATCGTCGTGGCCGCCGTCGTGGCCGTCCTCTTCTGGCTCATCGTGCGCCCCAACGTGGTCAAGTTCCGCGTCACCGACGCCGCCCTCGCGCAATTCGCGTACGGCAACAACAACACGCTCCGCTACGACCTCGCCCTCAACGTCTCGATCCGCAACCCGAACCGCAGGGTCGGCATCTACTACGACGACGTCGAGGCGCTCGCGCTGTACCAGGATGTCCGGTTCGGGTCCCAGACCCTGGGTCCCTTCTTCCAGCACCACAAGAACACCACCGTGTTGAGCCCCGTCTTCAAGGGGCAGCACGTGGTGCCCCTCGGCGCCGACCAGGTTTCGGAGCTGGACAAGGAGAAGGGGTCGGGGGTTTACTCCATCGATGTGAAGCTGCTCATGACGGTTCGGTTCAAGTTCGTGCTGTTCAAGACCGGAAACGTGAAGCCCAAAATTCAGTGTGAGTTGCACGTGCCGCTGAAATCGCCGAACGGAACCGACGCTGTGTTTCAGGCTACGCAGTGCGACTGGGATTACAAACGGTGGTGGTTCCATTAG 702 0.6197 MSQLNGAYYGPSIPPPRKSYHRPSRGGGCLSCCCGCIFNCILGLICKILTAVIVVAAVVAVLFWLIVRPNVVKFRVTDAALAQFAYGNNNTLRYDLALNVSIRNPNRRVGIYYDDVEALALYQDVRFGSQTLGPFFQHHKNTTVLSPVFKGQHVVPLGADQVSELDKEKGSGVYSIDVKLLMTVRFKFVLFKTGNVKPKIQCELHVPLKSPNGTDAVFQATQCDWDYKRWWFH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2633 233 Pfam Late embryogenesis abundant protein 99 202 IPR004864 -
Ssu7g2633 233 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 27 227 - -
Ssu7g2633 233 PANTHER OS05G0367900 PROTEIN 27 227 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2633 Ssu-Chr7 52388014 52388715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2633 66 214 SNARE and Associated Proteins AT1G32270 39.735 3.24e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2633 - - aprc:113873272 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0800 4 12442306 12442989 Ssu7g2633 7 52388014 52388715 PCT