Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2622 ATGTCCAGTGGCTCCAGAAGAAAGCTAGCTCTGAACACCGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCAGGAGGCCCAGGCTTCTCCGGCACATATTCAACCCGAAACCGCGGCCCAAGAAGCCCAGTTACCGGGCCCGCGGGCTTCAGTGGGGCGAGGACAGAGACGACACGGCCACGAGCAGCACCACCAACACCTCTGCCGCCACGTTCTCCCCGTGCGACGCGGACTCGTCCTCGCAGCTCCGCGACAGCGCCAAGAGCGTGCGAGGGTTCGGGCGCACGGGGAGCGAGGGCGTGGCGGTGGAGAAAGACTCCGACGACCCTTACTTGGACTTCAGGCACTCCATGCTGCAAATGATACTGGAGAACGAGATATACTCCAAGGACGACCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAATTCGCCCGACCACCACGGGGTTATAGTCAGGGCGTTTACGGAGATCTGGAACGGGGTGTTCTCGGCGAGGTCCCGTTCCCCCGGGTTCCACCTGACCCGTAAGTCACGTGACCTCTAG 546 0.6209 MSSGSRRKLALNTVSVSLGCGSCRRPRLLRHIFNPKPRPKKPSYRARGLQWGEDRDDTATSSTTNTSAATFSPCDADSSSQLRDSAKSVRGFGRTGSEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSARSRSPGFHLTRKSRDL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2622 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 167 IPR038933 GO:0045892
Ssu7g2622 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Ssu7g2622 181 MobiDBLite consensus disorder prediction 32 103 - -
Ssu7g2622 181 MobiDBLite consensus disorder prediction 55 86 - -
Ssu7g2622 181 Pfam Transcriptional repressor, ovate 106 162 IPR006458 -
Ssu7g2622 181 PANTHER TRANSCRIPTION REPRESSOR OFP6 5 167 - -
Ssu7g2622 181 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Ssu7g2622 181 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2622 Ssu-Chr7 51825160 51825705 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu7g2622 Ovate 2.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2622 - - pvu:PHAVU_007G269800g 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2622 7 51825160 51825705 Ssu7g2622 7 51825160 51825705 ECH