Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2621 ATGCCAGGTGAGGGTTCTGGTAGAGGGAGTTCATATCGCGTGAGGTGTTCTCTGTGTTTTCCTAGTCGAAGGAGAAGCAAAACTTCTCTGTCTCTGTCATGGTATTGGATCTTTGTTTCTCTATTGTATTGGATTCAAATTGAAAGGTTGCTAGAAATCGGTGTGAGATCCTCGTCTTCATCATGGGCGTGGCCATCATGCCATCAGCCCAAAACCCTCTCATTCAgagccgccgccgccgccgtcGCCACCACCACAGCCACCGTCGACGACGTCGTTTTGAAACCCTTTAACTCGCCGTTCGTGGACGAAACCCCCGAGTCGTTTTTCACCGAGTCTCCGAACTCCGTGAGCTTCTCAACGGCTTCGGACGAGTCGCGCGGCAGGGACCCGATCGAGACGGTGATTCGCGGGCTGCGTTCGGATCGGCTTTTCTTCGAGCCGGACGAGACGAGCTCCATACTGGAGGCGAAGTTGACGAGCCACGTGCCGTTCAAAAACAGCGTCGTTTTGTCGATGGATTCCAAGGACCCTTACGTGGATTTCCAAAGGTCCATGGAGGAGATGGTGGAGACGCACGGCGTCAACGACTGGGAGGGTCTCGAGGAGCTTCTGTGCTGGTACTTGAAGGTCAACGGGAAAAGCACTCACGGGTTTATCGTGGGTGCTTTCGTTGATTTGTTGTTGGGTCTCGCGTTTGGTTCTAATTCATCGTGTTCGGAGCATTCTCCTCCTTCATCGTTTTACagctctctctcttcttcttgcAGCACTCGCTGTGTTTCGTGTCTGGAAGTCGAGGAGGAGGAGGTTGGTGGTGCTAGTTCGTCTTTGTTGTTAGCACAGGTTAAGGACGAGATTTCACCTGAAGATGAAGCATCGTCTTCATCTTCGAACAACTGA 903 0.495 MPGEGSGRGSSYRVRCSLCFPSRRRSKTSLSLSWYWIFVSLLYWIQIERLLEIGVRSSSSSWAWPSCHQPKTLSFRAAAAAVATTTATVDDVVLKPFNSPFVDETPESFFTESPNSVSFSTASDESRGRDPIETVIRGLRSDRLFFEPDETSSILEAKLTSHVPFKNSVVLSMDSKDPYVDFQRSMEEMVETHGVNDWEGLEELLCWYLKVNGKSTHGFIVGAFVDLLLGLAFGSNSSCSEHSPPSSFYSSLSSSCSTRCVSCLEVEEEEVGGASSSLLLAQVKDEISPEDEASSSSSNN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2621 300 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 170 231 IPR006458 -
Ssu7g2621 300 Pfam Transcriptional repressor, ovate 175 231 IPR006458 -
Ssu7g2621 300 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 52 273 - -
Ssu7g2621 300 ProSiteProfiles OVATE domain profile. 171 230 IPR006458 -
Ssu7g2621 300 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 273 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2621 Ssu-Chr7 51761863 51765981 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu7g2621 Ovate 3.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2621 - - gmx:100816044 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2621 7 51761863 51765981 Ssu7g0281 7 4628352 4629077 ECH
Ssu7g2621 7 51761863 51765981 Ssu7g2621 7 51761863 51765981 ECH
Ssu4g0811 4 12633161 12633937 Ssu7g2621 7 51761863 51765981 PCT