Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2612 ATGGGGCGTGTTCGCACGAAGACGGTGAAGAAGTCGTCGCGGCAAGTGATAGAGAGGTACTACTCGCGCATGACGCTGGACTTCCACACGAACAAGAAGGTTCTGGAGGAGGTGGCGCTGATCCCCTCGAAGAGGCTGCGGAACAAGATCGCGGGGTTCTCGACGCACCTGATGAAGCGGATCCAGAAGGGTCCCGTGCGGGGGATCTCGCTGAAGCTGCAGGAGCAGGAGCGGGAGCGCCGCATGGACTTCGTCCCCGACGTCTCCGCCGTCGGGACCGACCACATCGAGGTCGACAGGGAGACGCTCGACATGCTCGCCGCCCTCGGAATGTCCGACATTCCCGGCGTCGTTCAGGTCGACCCCGTCCCCGTCCAGCCGCAGCTCGGCTTCGGCCGCGCCGCCGCGGGAAGGAGGTTTTAA 423 0.6454 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEQERERRMDFVPDVSAVGTDHIEVDRETLDMLAALGMSDIPGVVQVDPVPVQPQLGFGRAAAGRRF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2612 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Ssu7g2612 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 - -
Ssu7g2612 140 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Ssu7g2612 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Ssu7g2612 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Ssu7g2612 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 IPR001210 GO:0003735|GO:0005840|GO:0006412
Ssu7g2612 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2612 Ssu-Chr7 51567830 51568252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2612 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 78.723 5.49e-78 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2612 K02962 - gmx:100819067 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2612 7 51567830 51568252 Ssu7g2612 7 51567830 51568252 ECH