Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2592 ATGCTAGGCAAAAACATGGTATCATTGAAGAAACTAGCCAGAAAGGTGAAGGCCGTTGGTGGAGCAGACCCTGACCCTCCCTACCAAGAATGTTTGCTAAAGGGGCATGAGGAGGAAAAAGAATCACCCTCTAGCACAACCCCAACTGGTTTTTTTGCACTTTATGTGGGTAAGGAGCGCCAGAGATATGTGGTTCCAACAAGCTACCTTTCTCACCCTCTATTCAAGATGCTGCTGGAGAAGGCATACGATGAATTTGGGTTTGCACAGAGGAATGGCCTGGTGGTTCCATGCAGTGTTTCCACATTTCAGGAGGTGGTGAATGCTATAGAATGCAACAATGGCAAGTTTGACTTAGGCAAGATTTTTGAAGACTTTGCTTGA 384 0.4583 MLGKNMVSLKKLARKVKAVGGADPDPPYQECLLKGHEEEKESPSSTTPTGFFALYVGKERQRYVVPTSYLSHPLFKMLLEKAYDEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEDFA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2592 127 Pfam Auxin responsive protein 37 109 IPR003676 GO:0009733
Ssu7g2592 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 126 IPR003676 GO:0009733
Ssu7g2592 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2592 Ssu-Chr7 51184525 51184908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2592 43 113 Calmodulin-binding Proteins AT5G20810 52.113 1.21e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2592 K14488 - gmx:100790208 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2592 7 51184525 51184908 Ssu7g2592 7 51184525 51184908 ECH