Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2571 ATGCCTGTCCAAGCTCAGCATCAGCATCTGCAGCAGTATGGCATGTATCCAAATAACAACCCTACAATGGGACCTTCTTTTGTTGCTAGGCCGGTGATGGGGATCGGCGGCGGCGGTGGTGCTGGTGGGAATGTGGTTGCACTGCCTTACCAGGCGGTGGCTCAgggtggtggcggcggcggcggtgGTGGTGCAATTGGGGAGTCTTCTGGGTATGCTGGAAATGGAAAAAGGGATGCCGGGTACCCGGTTTGCTTTGGAGGGAGGGTGGTGAATGGTGGCGGTGGTTATGCGGCAGCAGCGGCGAGTAATATGGGAATGATGGCGCCGGTGAGCCCGGTTTCACCGGAGGGGATAGGTACTGGTGAAAACTCTGGGCAGTTTGGGATGGACATGGGTGTGTTGAGAGGGAGAAAGAGGGTGTTGGATGGTCCTGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCTAGAGCAAGAAAACAGGCCTACACGGTTGAATTAGAAGCAGAATTGACCCAATTAAAAGAAGAGAACGTGCAACTTAAACTAGCTCTGGCCGATCTTGAGAGGAGAAGAAAGCAACAGTGTTTAGAGGAAGTGAACGGAAGATTTCAAACCAAAGCTCAGAAGGCCAAAAAGAAATTGAGATCATTGAGAAGGACCCTAAGTTGCCCTTTATGA 714 0.4958 MPVQAQHQHLQQYGMYPNNNPTMGPSFVARPVMGIGGGGGAGGNVVALPYQAVAQGGGGGGGGGAIGESSGYAGNGKRDAGYPVCFGGRVVNGGGGYAAAAASNMGMMAPVSPVSPEGIGTGENSGQFGMDMGVLRGRKRVLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELTQLKEENVQLKLALADLERRRKQQCLEEVNGRFQTKAQKAKKKLRSLRRTLSCPL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2571 237 SUPERFAMILY Leucine zipper domain 152 196 IPR046347 GO:0003700|GO:0006355
Ssu7g2571 237 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 26 236 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Ssu7g2571 237 Coils Coil 168 202 - -
Ssu7g2571 237 Coils Coil 212 232 - -
Ssu7g2571 237 CDD bZIP_plant_BZIP46 152 206 - -
Ssu7g2571 237 Gene3D - 150 202 - -
Ssu7g2571 237 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 202 IPR004827 GO:0003700|GO:0006355
Ssu7g2571 237 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 155 170 IPR004827 GO:0003700|GO:0006355
Ssu7g2571 237 SMART brlzneu 148 213 IPR004827 GO:0003700|GO:0006355
Ssu7g2571 237 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 236 IPR043452 GO:0003700|GO:0045893
Ssu7g2571 237 Pfam bZIP transcription factor 152 202 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2571 Ssu-Chr7 50831251 50833367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2571 66 207 bZIP Transcription Factor Family AT2G36270 66.216 3.10e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu7g2571 bZIP_1 5.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2571 K14432 - gmx:100790948 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2571 7 50831251 50833367 Ssu7g2571 7 50831251 50833367 ECH
Ssu4g0864 4 13515510 13518197 Ssu7g2571 7 50831251 50833367 PCT