Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2563 ATGGGGCTGCAATTAGCTGAGGCTCGGATACAACGTGATGAGACGAATTATCCCCCGAAAATGTTGTTCGTTTTTGGGGACTCATATGCTGATACTGGGAACACGAGAATAGATCAACCTGGTTCGTGGAAACAGCCTTATGGCATCACTTTTCCCGGAAAACCAGCCGGTAGATTCTCCGACGGTAGAGTTCTGACCGATTACATTGCTACGTATTTGGGACTCAAATCGCCCGTTCCCTATAAATTTAGGAAACTGATGCAGCAACGTTTGAAATACGGGATGAATTTTGCATTTGGTGGTACCGGTGTATTTGACACATCCTCCAAAAACCCAAATATGACAATCCAAATAGATTTCTTCAAGCAGTTGATCAAAGAAAATATGTACACCACCTCAGATCTCAGCAACTCAGTGGCCCTCGCCTCCGTCGCCGGAAATGATTACAATTACTACTTGGCCACAAATGGCTCAATTGAGGGTTTCCCGTCTTTCATCGCCTCAGTGGTTAATCAAACTGTCACCAACTTGCTTCGCATCCAAAGGTTGGGAGTGAGGAAAATTGTTGTGGGTGGTCTACAACCGCTTGGATGTCTTCCTAGTTCCACAGCCCAATCCTCATTCAAACAATGTAATAGTACCTTCAACGACCTCGTAGTTCTCCACAACAATCTTTTGAACCAAGCTGTGACCAAGTTGAACCAACAAACCAAGGATCACTCCACCTTCATAGTTCTTGACCTTTACGACACCTTCATGTCAGTGCTGAACCATCCATCTACCAATAACATTACGGACCAGCTCAAGCCTTGCTGCTTTGGGCTAAGCAGCCAGTATTCTTGTGGAAGCGTGGACGAGAACAATGTTAAGAAATATAAGGTTTGTGAGCATCCCACATCAGCTTTCTTTTGGGATCTCTTGCACCCAACTCAAGCAGGTTGGCAGGCCGTGTATAACAAGTTGCAAACGACGAGTGCTCTTCATCAAATCCGATACTAG 999 0.4515 MGLQLAEARIQRDETNYPPKMLFVFGDSYADTGNTRIDQPGSWKQPYGITFPGKPAGRFSDGRVLTDYIATYLGLKSPVPYKFRKLMQQRLKYGMNFAFGGTGVFDTSSKNPNMTIQIDFFKQLIKENMYTTSDLSNSVALASVAGNDYNYYLATNGSIEGFPSFIASVVNQTVTNLLRIQRLGVRKIVVGGLQPLGCLPSSTAQSSFKQCNSTFNDLVVLHNNLLNQAVTKLNQQTKDHSTFIVLDLYDTFMSVLNHPSTNNITDQLKPCCFGLSSQYSCGSVDENNVKKYKVCEHPTSAFFWDLLHPTQAGWQAVYNKLQTTSALHQIRY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2563 332 PANTHER OSJNBB0059K02.9 PROTEIN 16 332 - -
Ssu7g2563 332 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 332 - -
Ssu7g2563 332 Pfam GDSL-like Lipase/Acylhydrolase 22 320 IPR001087 GO:0016788
Ssu7g2563 332 CDD SGNH_plant_lipase_like 22 321 IPR035669 -
Ssu7g2563 332 Gene3D SGNH hydrolase 11 328 IPR036514 -
Ssu7g2563 332 SUPERFAMILY SGNH hydrolase 19 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2563 Ssu-Chr7 50625958 50628967 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2563 14 317 Pollen Coat Proteome AT1G75930 30.675 9.22e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2563 - - gmx:100789208 568.926